DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and prickle1

DIOPT Version :10

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_012814522.1 Gene:prickle1 / 549693 XenbaseID:XB-GENE-486941 Length:871 Species:Xenopus tropicalis


Alignment Length:369 Identity:116/369 - (31%)
Similarity:168/369 - (45%) Gaps:73/369 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 NAPYYDRLFRSLHDKGISHDQC--HLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPK 547
            :||:|...:.|.. |.:|..:.  .|.:|:..|:..|        |:|:..:....||:..|   
 Frog     6 SAPWYCGTYNSPW-KSVSSPRAIDELERPITTVYMPL--------EMDQKISKHTFGCQRSS--- 58

  Fly   548 PSLGELPTSQSSDSGFHSKPPT---PGYGSEDLTAGQGRFASIPGIEDMNMYPSCAG-------- 601
                    :...|||...:..|   ||...|.:   |..||.:|  |....|.:..|        
 Frog    59 --------TSDDDSGCAMEEYTWVPPGLRPEQV---QLYFACLP--EAKVPYVNSVGEKCRIKQL 110

  Fly   602 ---MP--------------EQFQQLRLHG----DEASGKNSTRTI-------LCADCNQPIAMGE 638
               :|              |:.::|::..    .||.|:.:.:.:       :|..|.:.|..||
 Frog   111 LYQLPPHDNEVRYCQSLSEEEKKELQMFSAQRKKEALGRGNIKMLSRAVMHAMCEKCGEKINGGE 175

  Fly   639 VAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTK 703
            :|:...|||..:.|||.||.|.||.|||.||:||:..|::.|||..|..|| |||.||||:||..
 Frog   176 IAIFVSRAGPGVCWHPSCFVCSTCNELLVDLIYFYQDGKIHCGRHHAELLK-PRCSACDEIIFAD 239

  Fly   704 EYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG 768
            |.|.||...:|:.||.||:|:..|.||:||.  |...|.|..|::..:|..|:.|...||.....
 Frog   240 ECTEAEGRHWHMNHFSCYECETVLGGQRYIM--KDGRPFCCGCFESHYAEYCESCGEHIGVDHAQ 302

  Fly   769 VAWGDVHWHA--SCFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
            :.:...||||  :||.||  ||...|:|..|..|:...:||..|
 Frog   303 MTYDGQHWHATETCFSCA--QCKVSLLGCPFLPKKGRIYCSKAC 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 28/56 (50%)
LIM2_Testin_like 691..748 CDD:188727 28/56 (50%)
LIM 755..810 CDD:413332 20/56 (36%)
prickle1XP_012814522.1 PET_Prickle 60..156 CDD:193602 20/100 (20%)
LIM1_Prickle 164..222 CDD:188799 28/57 (49%)
LIM2_Prickle 227..282 CDD:188802 28/56 (50%)
LIM3_Prickle 287..345 CDD:188804 21/60 (35%)
Blue background indicates that the domain is not in the aligned region.

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