DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and PRICKLE3

DIOPT Version :10

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_006141.2 Gene:PRICKLE3 / 4007 HGNCID:6645 Length:615 Species:Homo sapiens


Alignment Length:812 Identity:147/812 - (18%)
Similarity:207/812 - (25%) Gaps:476/812 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SRREQLKRS-KLGHEAGAGAPCAECKDKCPGLDLHFWRKVCRNCKCPKIQ---HVCPDD------ 78
            |||.:..|: ....:...|.||..|:::|||..||.|||:|::||||:.:   |..|.|      
Human     6 SRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMC 70

  Fly    79 ------------DDATGWAQFEILGQIRAKPAYIKIKALASQPVQLEWVPPNAAPDVVTDYMEKL 131
                        ||.:|.|..|                       ..||||...|:.|..:...|
Human    71 RLISDFQRHSISDDDSGCASEE-----------------------YAWVPPGLKPEQVYQFFSCL 112

  Fly   132 GTAQIPVAGSDAALKRKMQLELQVPPHDLDAALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRL 196
            ...::|...|.....|..||..|:||||.:|..|..|.|.|..:|:.:.|:.:.:.:|:|:|   
Human   113 PEDKVPYVNSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIV--- 174

  Fly   197 GDRLNHAQVEHVAPALMPTQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVA 261
                                                                             
Human   175 ----------------------------------------------------------------- 174

  Fly   262 FSEPLCESTAQFEENGALRAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLG 326
                                                                             
Human   175 ----------------------------------------------------------------- 174

  Fly   327 PIAEFRKEYVNNPQFRAEINTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRR 391
                                                                             
Human   175 ----------------------------------------------------------------- 174

  Fly   392 VKFGGVSTIVYDCGLPANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLA 456
                                                                             
Human   175 ----------------------------------------------------------------- 174

  Fly   457 ELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLD 521
                                              |:|                            
Human   175 ----------------------------------RIF---------------------------- 177

  Fly   522 DDQLLDEIDKVFADMANGCKDISYPKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFAS 586
                                                         |.|                 
Human   178 ---------------------------------------------PVT----------------- 180

  Fly   587 IPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIA 651
            |.|                                   .:|.:|.:.|..|::||.|.|||....
Human   181 ITG-----------------------------------AICEECGKQIGGGDIAVFASRAGLGAC 210

  Fly   652 WHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIK 716
            |||.||.|.||:|||.||:||:|.|:|:|||..|..|: |||:||||:||:.|.|.||...:|:.
Human   211 WHPQCFVCTTCQELLVDLIYFYHVGKVYCGRHHAECLR-PRCQACDEIIFSPECTEAEGRHWHMD 274

  Fly   717 HFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHAS- 779
            ||||::|:..|.||:|:.  :.:.|.|..||:...|..|..|...|| .||| :|:...||||| 
Human   275 HFCCFECEASLGGQRYVM--RQSRPHCCACYEARHAEYCDGCGEHIG-LDQGQMAYEGQHWHASD 336

  Fly   780 -CFVCAGVQCSKPLIGGRFCVKENMPFCSPTC 810
             ||.|:  :|.:.|:|..|..:..:.|||..|
Human   337 RCFCCS--RCGRALLGRPFLPRRGLIFCSRAC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 27/86 (31%)
LIM1_Testin_like 627..684 CDD:188726 31/56 (55%)
LIM2_Testin_like 691..748 CDD:188727 26/56 (46%)
LIM 755..810 CDD:413332 23/57 (40%)
PRICKLE3NP_006141.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 5/19 (26%)
PET_Prickle 82..178 CDD:193602 34/488 (7%)
LIM1_Prickle 186..244 CDD:188799 31/57 (54%)
LIM2_Prickle 249..304 CDD:188802 26/56 (46%)
LIM3_Prickle 309..367 CDD:188804 24/61 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..567
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..615
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.