DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and PRICKLE4

DIOPT Version :10

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_037529.3 Gene:PRICKLE4 / 29964 HGNCID:16805 Length:384 Species:Homo sapiens


Alignment Length:265 Identity:84/265 - (31%)
Similarity:110/265 - (41%) Gaps:66/265 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 PKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPGI-------EDMNMYPSCAGMP 603
            |||.....|.:..||||.     .||...|| |..||     |.:       .|.|..|:..|:.
Human    15 PKPQDPGPPANSDSDSGH-----LPGEDPED-THAQG-----PAVLSLGSLCLDTNQAPNWTGLQ 68

  Fly   604 EQFQQL-------------------------RLHGDEASGKNSTRTIL-------CADCNQPIAM 636
            ...|||                         .....||.|:...|.:|       |..|.:.:..
Human    69 TLLQQLPPQDIDERYCLALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKP 133

  Fly   637 GEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIF 701
            ||..|.|.|||::..||..||.|..|.:.|.:|:||:|.||::|||..|..|: |||.|||:|||
Human   134 GEYGVFAARAGEQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLR-PRCPACDQLIF 197

  Fly   702 TKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPAD 766
            :...|.||...:|..||||..|..||.|.:|.....|  |.|..|::..:             :|
Human   198 SWRCTEAEGQRWHENHFCCQDCAGPLGGGRYALPGGS--PCCPSCFENRY-------------SD 247

  Fly   767 QGVAW 771
            .|.:|
Human   248 AGSSW 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 25/56 (45%)
LIM2_Testin_like 691..748 CDD:188727 26/56 (46%)
LIM 755..810 CDD:413332 3/17 (18%)
PRICKLE4NP_037529.3 PET_OEBT 1..116 CDD:193603 27/111 (24%)
LIM1_Testin_like 124..181 CDD:188726 25/56 (45%)
LIM2_Testin_like 187..242 CDD:188727 26/56 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.