DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and adgrl3.1

DIOPT Version :10

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_005170997.2 Gene:adgrl3.1 / 560631 ZFINID:ZDB-GENE-030131-7856 Length:1540 Species:Danio rerio


Alignment Length:368 Identity:84/368 - (22%)
Similarity:138/368 - (37%) Gaps:121/368 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 TWKTVAIVISLICIILTISVYLYVEKLRN----LHGKCFICYLASLFLGYFFLVLNVWKYSSGF- 269
            ||  |.|::||:|:::.|..:.:...|::    :|....|    |||:.....:..:.:..... 
Zfish   874 TW--VGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLCI----SLFIAETLFLTGINRADQPIV 932

  Fly   270 CVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPE------NPFRAYNLYAWGIPLI 328
            |.....|.:|..:|||.|:.:.|:.|.|           :|.|      :..:.:.|..:|:|.:
Zfish   933 CAVFAALLHFFFLAAFTWMFLEGVQLYI-----------MLVEVFESEYSRTKYFYLTGYGVPAV 986

  Fly   329 MTAITYTADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIY-FYGPMLLLIAFNII--------MFV 384
            :.|::...|.        ...|..:.||:...  |..|: |.||..|:|..|:|        ||.
Zfish   987 IVAVSAAVDY--------RSYGTERVCWLRLD--TYFIWSFIGPATLIIMLNVIFLGIALYKMFH 1041

  Fly   385 LSAIY------IYNIKKNVKGLVHKQQTNQQINDQQMFAIFLRLFILMGLSWSF---------EI 434
            .:||.      :.|||..|.|.:                   .|..|:||:|:|         .|
Zfish  1042 HTAILKPDSGCLDNIKSWVIGAI-------------------ALLCLLGLTWAFGLMYINESTVI 1087

  Fly   435 LSFLLTKQQAWARALMVADYFNWSQGTIIFVLF-ILKPSI-------LKLIIAGGRQ-------- 483
            :::|.|             .||..||..||:.. ||:..:       |:.....|:.        
Zfish  1088 MAYLFT-------------IFNSLQGMFIFIFHCILQKKVRKEYGRCLRTHCCSGKSVESTISTS 1139

  Fly   484 ------NLPGSHH-NSRSKAAR-YNST-HTACEGSI--ADPNA 515
                  ..||.:. ||:|:..| :|.| ....|.|.  ||.|:
Zfish  1140 TKTSTARTPGRYSTNSQSRIRRMWNDTVRKQSESSFITADMNS 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:429053
7tmB3_Methuselah-like 205..477 CDD:410632 70/309 (23%)
TM helix 1 207..232 CDD:410632 8/21 (38%)
TM helix 2 241..263 CDD:410632 4/21 (19%)
TM helix 3 271..298 CDD:410632 8/26 (31%)
TM helix 4 315..335 CDD:410632 4/19 (21%)
TM helix 5 361..390 CDD:410632 13/43 (30%)
TM helix 6 411..438 CDD:410632 7/35 (20%)
TM helix 7 446..471 CDD:410632 8/25 (32%)
adgrl3.1XP_005170997.2 None
Blue background indicates that the domain is not in the aligned region.

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