DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl4 and adgre5a

DIOPT Version :10

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_073801131.1 Gene:adgre5a / 100538283 ZFINID:ZDB-GENE-130530-571 Length:710 Species:Danio rerio


Alignment Length:542 Identity:111/542 - (20%)
Similarity:204/542 - (37%) Gaps:150/542 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LMPKSNAEIPGCDF------------FDTVDISKAPRFSNGSYL-YEGLLIPAHLTAEYDYKLLA 63
            |:.|.|:..||..|            :||....:...||..:.| |.||                
Zfish   265 LLVKRNSTPPGGRFMVSSNGTWFTSHWDTATGKEYMGFSTVALLSYTGL---------------- 313

  Fly    64 DDSKEKVASHVRGCACHLRPCIRFCCPQYQKMQKSKCYGDM------SEDELNKHDPFVNVTLSD 122
            ::|..:..:|:                :.|:.|..|...::      :||..|...| ||.|.| 
Zfish   314 EESLSRYFNHL----------------EKQEKQTFKINSEIVTATVSNEDTANLEKP-VNFTFS- 360

  Fly   123 GSVVRRHFKEDLIVQSDLAKPGCPRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCVQHL 187
                  |.|::.:...      |   .|.:|:|.|..::. .|.|.:|                 
Zfish   361 ------HLKKENVNHI------C---VFWDHDLDGGAWST-RNCSTVR----------------- 392

  Fly   188 SFKDDSIRIAPH---FCPLSSEHS-------RTWKTVAIVISLICIILTISVYLYVEKLRNLHGK 242
            |..|::|....|   |..|.:.:.       |....|.:.:||:|:::.|..:..|..:::....
Zfish   393 STADETICSCSHLSSFAVLMALYDIGDVYELRLISWVGLSLSLVCLLICIITFYAVRSIQSTRNT 457

  Fly   243 CFICYLASLFLGYFFLVLNVWKYSS--GFCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNC 305
            ..:....|||:.||..::.:.:..:  |..|.||.|.|| .:|:|.|:.:.|:.|.....|..|.
Zfish   458 IHMHLCISLFIAYFVFLVGITRTENKVGCSVVAGVLHYF-FLASFCWMCLEGVQLFRMVVLVFNT 521

  Fly   306 LHRLLPENPFRAYNLYA-WGIPLIMTAITYTADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFY 369
            ..|       ..|...| :|:|.::.||:.:.:        ....|....||:...|..:. .||
Zfish   522 TLR-------HVYMFAAGYGVPALIVAISASVN--------ASGYGTPNYCWLNIDDGFIW-SFY 570

  Fly   370 GPMLLLIAFNIIMFVLSAIYIYNIKKNVKGLVHKQQTNQQINDQQMFAIF----LRLFILMGLSW 430
            ||:.::|..|:..|:::   |:.:.:....|      |..:::.:....|    :....::|:.|
Zfish   571 GPVCIIIVVNVFFFLIT---IWKLAEKFSSL------NPDLDNLRKIKAFTVTAIAQLCVLGIMW 626

  Fly   431 SFEILSFLLTKQQAWARALMVADYF---NWSQGTIIFVL--FILK------PSILKLIIAGGRQN 484
            .|....|..|       :|.::..|   ...||.::|::  ::.|      ...|..|.|..::.
Zfish   627 VFGCFQFDST-------SLAMSYIFTILGSLQGVLMFIMHCWLSKQVRDEYAKFLSCICAPQKRK 684

  Fly   485 LP--GSHHNSRSKAARYNSTHT 504
            ..  .|:..|:|:|:: :..||
Zfish   685 YSEFSSNQTSKSQASK-SVQHT 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:429053 36/199 (18%)
7tmB3_Methuselah-like 205..477 CDD:410632 60/296 (20%)
TM helix 1 207..232 CDD:410632 6/31 (19%)
TM helix 2 241..263 CDD:410632 5/21 (24%)
TM helix 3 271..298 CDD:410632 11/26 (42%)
TM helix 4 315..335 CDD:410632 6/20 (30%)
TM helix 5 361..390 CDD:410632 8/28 (29%)
TM helix 6 411..438 CDD:410632 4/30 (13%)
TM helix 7 446..471 CDD:410632 6/35 (17%)
adgre5aXP_073801131.1 None

Return to query results.
Submit another query.