DRSC/TRiP Functional Genomics Resources

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Protein Alignment: cnk and Samd3

Sequence 1:NP_001286524.1 Gene:cnk FlyBaseID:FBgn0286070 Length:1557 Species:Drosophila melanogaster
Sequence 2:XP_006512804.1 Gene:Samd3 MGIID:2685469 Length:541 Species:Mus musculus

Alignment Length:296 Identity:55/297 (19%)
Similarity:105/297 (35%) Gaps:101/297 (34%)


  Fly     9 WTPDQVTDWIKGLDESMKGYLYEFSKQEIGGRALLNIRPYELENLGMLRIGHQEIVLEAVENLRN 73
            |:.|||..|:  :::::...:..|.::|:.|..||.:....::.| :.:||||.::::.::..:.
Mouse    31 WSVDQVCKWL--VEKNLGELVPRFQEEEVSGATLLALNDRMVQQL-VKKIGHQAVLMDFIKKYKQ 92

  Fly    74 FHYHLKN---------------------------------------DNLQFMALHVATAAKNLHR 99
            .:..||.                                       || :.:...|....:|:..
Mouse    93 G
NQELKPTGGPADTSTLTPAQAAPEHEQNPSPTSHGDQTSLYPAVLDN-RLIDQRVLKQRRNVKH 156

  Fly   100 ELARNHA---------------------ESTKID----TRILH----DITRTIATLKPLVGSLER 135
            .|||:.|                     |..:.|    .||:.    |:|      |.|.|||..
Mouse   157 VLARHKALQWTKSYILPEFPYDVKCMLVEQKRPDHSMRIRIIEFLQADMT------KYLEGSLYP 215

  Fly   136 TPFRKQEMYREYCGNVLK---------CGLELATIAHRDRFALQPVPAIRQSAERLENLANF--- 188
            |    .:.|.:....:|:         ||..|...|.:|||.....| |....:.:.|...|   
Mouse   216 T----TQQYNDVVNALLQAHPFLDEDGCGFFLWKRALKDRFKYIRRP-IEDDEQVMRNKCKFGHR 275

  Fly   189 ---VIQDISDPMVLQPASLNLVTLKKRESELGFNIE 221
               ..:.::|   :|...:.:|.:|:..:.|...::
Mouse   276 RGQTRKSLAD---IQSNEIKIVQIKEESAHLDSEVD 308

Known Domains:


GeneSequenceDomainRegion External IDIdentity
cnkNP_001286524.1 SAM_CNK1,2,3-suppressor 6..74 CDD:188910 15/65 (23%)
SAM 7..74 CDD:197735 15/65 (23%)
CRIC_ras_sig 82..165 CDD:287501 25/121 (21%)
PDZ_signaling 206..283 CDD:238492 3/17 (18%)
PH 720..814 CDD:278594
PH_CNK_insect-like 720..810 CDD:270135
Samd3XP_006512804.1 SAM_Samd3 28..93 CDD:188925 15/65 (23%)
SAM 28..92 CDD:197735 15/64 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C61982633
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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