DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnk and Samd3

DIOPT Version :10

Sequence 1:NP_725671.1 Gene:cnk / 36952 FlyBaseID:FBgn0286070 Length:1557 Species:Drosophila melanogaster
Sequence 2:XP_006512805.1 Gene:Samd3 / 268288 MGIID:2685469 Length:527 Species:Mus musculus


Alignment Length:296 Identity:55/296 - (18%)
Similarity:105/296 - (35%) Gaps:101/296 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WTPDQVTDWIKGLDESMKGYLYEFSKQEIGGRALLNIRPYELENLGMLRIGHQEIVLEAVENLRN 73
            |:.|||..|:  :::::...:..|.::|:.|..||.:....::.| :.:||||.::::.::..:.
Mouse    17 WSVDQVCKWL--VEKNLGELVPRFQEEEVSGATLLALNDRMVQQL-VKKIGHQAVLMDFIKKYKQ 78

  Fly    74 FHYHLKN---------------------------------------DNLQFMALHVATAAKNLHR 99
            .:..||.                                       || :.:...|....:|:..
Mouse    79 G
NQELKPTGGPADTSTLTPAQAAPEHEQNPSPTSHGDQTSLYPAVLDN-RLIDQRVLKQRRNVKH 142

  Fly   100 ELARNHA---------------------ESTKID----TRILH----DITRTIATLKPLVGSLER 135
            .|||:.|                     |..:.|    .||:.    |:|      |.|.|||..
Mouse   143 VLARHKALQWTKSYILPEFPYDVKCMLVEQKRPDHSMRIRIIEFLQADMT------KYLEGSLYP 201

  Fly   136 TPFRKQEMYREYCGNVLK---------CGLELATIAHRDRFALQPVPAIRQSAERLENLANF--- 188
            |    .:.|.:....:|:         ||..|...|.:|||.....| |....:.:.|...|   
Mouse   202 T----TQQYNDVVNALLQAHPFLDEDGCGFFLWKRALKDRFKYIRRP-IEDDEQVMRNKCKFGHR 261

  Fly   189 ---VIQDISDPMVLQPASLNLVTLKKRESELGFNIE 221
               ..:.::|   :|...:.:|.:|:..:.|...::
Mouse   262 RGQTRKSLAD---IQSNEIKIVQIKEESAHLDSEVD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnkNP_725671.1 SAM_CNK1,2,3-suppressor 6..74 CDD:188910 15/64 (23%)
CRIC_ras_sig 82..165 CDD:463138 25/120 (21%)
PDZ_CNK1_2_3-like 203..283 CDD:467230 3/19 (16%)
PH_CNK_insect-like 720..810 CDD:270135
Samd3XP_006512805.1 SAM_Samd3 14..79 CDD:188925 15/64 (23%)
Blue background indicates that the domain is not in the aligned region.

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