DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Gbp2 and LOC105948141

Sequence 1:NP_001286521.1 Gene:Gbp2 FlyBaseID:FBgn0034200 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_017952166.1 Gene:LOC105948141 ID: Length:400 Species:Xenopus tropicalis

Alignment Length:181 Identity:46/182 (25%)
Similarity:70/182 (38%) Gaps:14/182 (8%)


  Fly   219 GQNNGGFRQPSQNSGGFQQP--GQSTGGFQQPGQSSGGFQQPGQSTGGFQQPGQSTGGFQQPGQS 281
            |.:|....||..::....|.  |.|.....|.|.|:....|.|.|.....|.|.|.....|.|.|
 Frog    22 GNSNSSLVQPGLSNSSLVQVGLGNSNSSLVQAGLSNSSLVQAGLSNSSLVQVGLSNSSLVQAGLS 86

  Fly   282 TGGFRQPDQSSGGFQQP--DQNSGEFQQPGLNQGR----KPGTSNNSIQPRPGSADEDFSDFNFQ 340
            .....||..|:....|.  ..::....||||:...    :.|.||:|: .:.|.::.........
 Frog    87 NSSLVQPGLSNSSLVQVGLGNSNSSLVQPGLSNSSLVLVQAGLSNSSL-VQAGLSNSSLVQAGLS 150

  Fly   341 SPKTLQPRPGQDYET---AGSGGAQT--IQPIPGHPQSSVIQPIPGRAQSS 386
            :...:|...|....:   ||.|.:.:  :||..|:..||::|...|.:.||
 Frog   151 NSSLVQVGLGNSNSSLVQAGLGNSNSSLVQPGLGNSNSSLVQVGLGNSNSS 201

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Gbp2NP_001286521.1 dnaA 26..>204 CDD:237605
PTZ00395 <124..>428 CDD:185594 46/182 (25%)
LOC105948141XP_017952166.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0002037
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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