DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-d and AMY2

DIOPT Version :10

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_177740.1 Gene:AMY2 / 843945 AraportID:AT1G76130 Length:413 Species:Arabidopsis thaliana


Alignment Length:352 Identity:82/352 - (23%)
Similarity:127/352 - (36%) Gaps:97/352 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAVKDSRPWWERYQPIS-YKLETRSGNEEQFA 96
            |.::| |.::..:..: :..:|:....:.|.:::...      |.|.|.. |.|.:..|:|....
plant    37 HKYDW-WRNLDGKVPD-IAKSGFTSAWLPPPSQSLAP------EGYLPQDLYSLNSAYGSEHLLK 93

  Fly    97 SMVKRCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFNPTCAISNYNDA 161
            |::::.....||...|:|.||..  |.|.|.||     ....|.|:   ||.:          |.
plant    94 SLLRKMKQYKVRAMADIVINHRV--GTTRGHGG-----MYNRYDGI---SLPW----------DE 138

  Fly   162 NEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNT 226
            :.|.:| ..||.:.:.|:::              .||.  .||..:|....|   |.|.|:.|..
plant   139 HAVTSC-TGGLGNRSTGDNF--------------NGVP--NVDHTQHFVRKD---IIGWLRWLRN 183

  Fly   227 DHG-------FASGSKAYIVQEVIDMG------GEAISKSEYTGLGA-ITEFRHS-------DSI 270
            ..|       ||.|..|..|:|.|...      ||......|.|.|. ..:..|.       |:.
plant   184 TVGFQDFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSHRQRIISWIDAT 248

  Fly   271 GKV-----FRGKDQLQYLTNWGTAWGFAAS------------DRSLVFVDNHDNQRGHGAGGADV 318
            |::     |..|..||.... |..|....:            .|::.|:||||.       |:..
plant   249 GQISAAFDFTTKGILQEAVK-GQYWRLCDAQGKPPGVMGWWPSRAVTFLDNHDT-------GSTQ 305

  Fly   319 LTYKVPKQYKMAS-AFMLAHPFGTPRV 344
            ..:..|..:.|.. |::|.|| |.|.|
plant   306 AHWPFPSHHVMEGYAYILTHP-GIPCV 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 82/352 (23%)
Aamy_C 405..493 CDD:214749
AMY2NP_177740.1 PLN02361 15..413 CDD:177990 82/352 (23%)
Blue background indicates that the domain is not in the aligned region.

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