DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amy-d and LOC1280315

DIOPT Version :10

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_320159.4 Gene:LOC1280315 / 1280315 VectorBaseID:AGAMI1_004648 Length:605 Species:Anopheles gambiae


Alignment Length:541 Identity:106/541 - (19%)
Similarity:168/541 - (31%) Gaps:190/541 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FLAKSIVCLSLLAVANAQFDTNYASG--RSGMVH------LFEWKWDDIAAECE-----NFLGPN 53
            |||:|           ||.|....:|  :|.:.:      ..:...|.|...|.     .:|..:
Mosquito    22 FLARS-----------AQHDKRNDNGWWKSAVFYQIYPRSFMDSNGDGIGDLCGITSRLGYLDLH 75

  Fly    54 GYAGVQVSPVNENAVKDSRPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHM 118
            ...|..:||:..:.:.|.......|    ||::...|....|.:|:|:.|.:.:...:|.|.|| 
Mosquito    76 NITGFWLSPIFASPMADFGYDISDY----YKIQPEYGTMADFDAMLKKANDLNMEVILDFVPNH- 135

  Fly   119 AADGGTYGTGGSTASPSSKSY----PGVPYSSLDFNPTCAISNYNDAN--EVRNCELVGL----- 172
            .:|...:........|..:.:    ||.|      ||       ||.|  .:..|..|..     
Mosquito   136 TSDEHEWFKKSELRVPGFEDFYIWHPGRP------NP-------NDTNGQPLAPCNWVSFFRGSA 187

  Fly   173 -------------------RDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMW-------- 210
                               .|||..|..|.:.:.:.:...:..||||||:||...::        
Mosquito   188 WQWSKTRKEYYLHQFSVKQPDLNYRNPAVVEAMKDVMRFWLGRGVAGFRIDAVPTLFEVAPDADG 252

  Fly   211 ----------------PADLAVIYGRLKNLNTDHGFA------SGSKAYIVQEVIDM-------- 245
                            |..|..||.:.:|...|..:.      ...:.|.|:|.|.|        
Mosquito   253 QYPDEPLSGNTNDPDDPGYLVHIYTQDRNETLDMVYQWRAVLDEFQQQYGVRERIIMAETYSPID 317

  Fly   246 ------GGEAISKSEYTGLGAITEFRHSDSIGKVFRGKDQLQYLTNWGTAWGFAASDR-----SL 299
                  |.|.:     .|......|.....:.|....:|.|..:..|        .|.     |:
Mosquito   318 IVMKYYGNETV-----PGAQIPFNFHFITDLSKDSTAQDFLNTINYW--------IDHMPPMDSV 369

  Fly   300 V---FVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAHP----------FGTPRVMSSFSFT 351
            |   .:.|||..|.....|.|::        ...:..||:.|          .|...|.  .|:.
Mosquito   370 VPNWVLGNHDQHRVASRFGEDMI--------DSMNMIMLSLPGVAVTYNGEEIGMDDVW--ISYN 424

  Fly   352 DT------DQGP-----PTTDGHNIASPIFNSDNSCSGGW-VCEHRWRQI---YNMV-------- 393
            ||      :.||     .|.|...  :| |..|:|.:.|: ...|.|..:   |.:|        
Mosquito   425 DTVDPAACNAGPDRYQYTTRDPER--TP-FQWDSSKNAGFSTANHTWLPVSPNYTLVNVEKQLVE 486

  Fly   394 -------AFRNAVGLDEIQNW 407
                   .:|:.|.:.:|.::
Mosquito   487 YEHSHLHVYRSLVRMKQIVSY 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 96/503 (19%)
Aamy_C 405..493 CDD:214749 0/3 (0%)
LOC1280315XP_320159.4 None

Return to query results.
Submit another query.