DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-d and Amy1

DIOPT Version :10

Sequence 1:NP_523768.1 Gene:Amy-d / 36932 FlyBaseID:FBgn0000078 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_031472.2 Gene:Amy1 / 11722 MGIID:88019 Length:511 Species:Mus musculus


Alignment Length:512 Identity:278/512 - (54%)
Similarity:349/512 - (68%) Gaps:24/512 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSIVCLSLLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAV- 68
            |..:.|||:....||:|.:...||:.:||||||:|.|||.|||.:|.|||:|||||||.|||.| 
Mouse     2 KFFLLLSLIGFCWAQYDPHTQYGRTAIVHLFEWRWVDIAKECERYLAPNGFAGVQVSPPNENIVV 66

  Fly    69 -KDSRPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHM---AADGGTYGTGG 129
             ..||||||||||||||:.:|||||::|..||.|||.||||.|||.|.|||   .|..|...|.|
Mouse    67 HSPSRPWWERYQPISYKICSRSGNEDEFRDMVNRCNNVGVRIYVDAVINHMCGVGAQAGQSSTCG 131

  Fly   130 STASPSSKSYPGVPYSSLDFNP-TC-----AISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVE 188
            |..:|:::.:||||||..|||. .|     .|.||.||.:||:|.|.||.||.....||:.||.:
Mouse   132 SYFNPNNRDFPGVPYSGFDFNDGKCRTASGGIENYQDAAQVRDCRLSGLLDLALEKDYVRTKVAD 196

  Fly   189 FLDHLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKS 253
            :::||||:||||||:||:|||||.|:..|..:|.|||| ..|:.||:.:|.|||||:||||:|.:
Mouse   197 YMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNT-KWFSQGSRPFIFQEVIDLGGEAVSSN 260

  Fly   254 EYTGLGAITEFRHSDSIGKVFRGKD--QLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGA 316
            ||.|.|.:|||::...:|||.|..|  ::.||.|||..||...|||:||||||||||||||||||
Mouse   261 EYFGNGRVTEFKYGAKLGKVMRKWDGEKMSYLKNWGEGWGLMPSDRALVFVDNHDNQRGHGAGGA 325

  Fly   317 DVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSFTDTDQ---------GPPTTDGHNIASPIFNS 372
            .:||:...:.||||..||||||:|..|||||:.:....|         |||..:|......| |.
Mouse   326 SILTFWDARLYKMAVGFMLAHPYGFTRVMSSYYWPRNFQNGKDVNDWVGPPNNNGKTKEVSI-NP 389

  Fly   373 DNSCSGGWVCEHRWRQIYNMVAFRNAVGLDEIQNWWDSGSNQISFSRGSRGFVAFNNDNYDLNSS 437
            |::|...|:||||||||.|||||||.|......||||:.|||::|.||::||:.||||::.|:.:
Mouse   390 DSTCGNDWICEHRWRQIRNMVAFRNVVNGQPFANWWDNDSNQVAFGRGNKGFIVFNNDDWALSET 454

  Fly   438 LQTGLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||||||||||||||||.|...:|||..|.||:||:|...|.:|.:|..:|||..:|:
Mouse   455 LQTGLPAGTYCDVISGDKVDGNCTGIKVYVGNDGKAHFSISNSAEDPFIAIHAESKI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-dNP_523768.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 219/392 (56%)
Aamy_C 405..493 CDD:214749 49/87 (56%)
Amy1NP_031472.2 AmyAc_bac_euk_AmyA 25..416 CDD:200456 219/392 (56%)
Aamy_C 422..510 CDD:214749 49/87 (56%)

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