DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mov10 and LBA1

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_199512.2 Gene:LBA1 / 834747 AraportID:AT5G47010 Length:1254 Species:Arabidopsis thaliana


Alignment Length:719 Identity:180/719 - (25%)
Similarity:299/719 - (41%) Gaps:171/719 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QLIQSDVPVQRVSKLTYKITFKSTP-VNAEDFVAPNLD----------------QVVLVPKASLL 111
            ||....:..|:::|:  :..:|:.| ...||...|.:|                |.|..|...|.
plant   270 QLRARQISAQQINKI--EELWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLE 332

  Fly   112 AS--------------------PLPKQLVLALLPHPHED----LEPGDPM-LRHVASVDKVSSTT 151
            |.                    .|.|:.| |....|.|:    |.|||.: ||:       |...
plant   333 ADYDKMMKESQSKENLTVRWDIGLNKKRV-AYFVFPKEENELRLVPGDELRLRY-------SGDA 389

  Fly   152 VHVRF-SRKHKAVLSGQRFYAI-IRSRR---------LTIRYMYRALNLLQESPLVRRYLFPFPS 205
            ||..: |..|...|:.|...|: :|:.:         .::.:::::.:..:....::.:      
plant   390 VHPSWQSVGHVIKLTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNF------ 448

  Fly   206 WLTQLVDNSQIKVCCDGHLPNWMQGRPQEPATPTSLSLLNSTI----------YSNAEQLEAVQR 260
                .||.:.:    .|::.:.:.|...|      ..::.:|:          ..||.|:.||:.
plant   449 ----AVDETSV----SGYIYHQLLGHEVE------AQMVRNTLPRRFGVPGLPELNASQVNAVKS 499

  Fly   261 IVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIA---------- 315
            ::..|.:    ::.||||||||.|.. ||:....:|.|.::||.|.||.|.|.:|          
plant   500 VLQKPIS----LIQGPPGTGKTVTSA-AIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKV 559

  Fly   316 LKLC----EYIESNIR-LQEHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIY 375
            ::||    |.:.|.:. |..|:..:.|...:...:....:...|:|         :.|:..:..|
plant   560 VRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQG---------ELSSSDEKKY 615

  Fly   376 DHIKAS---RIVKYGIIVATLCTVARLVTDTLGRYNF-FTHIFIDEAGASTEPEALIG-IMGIKQ 435
            .::|.:   .|.:...::...|..|.    .|...|| |..:.|||:..:||||.||. ::|:||
plant   616 KNLKRATEREITQSADVICCTCVGAA----DLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQ 676

  Fly   436 TADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRS 500
                 |:|.|||.|||.||...:||..||::||.|||:....            :.:||...||.
plant   677 -----VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGI------------KPIRLQVQYRM 724

  Fly   501 HPQIVRLFNELYYNGEL-------KAQAPAMDVNLAANWSVLTNPQFPIIFQATHGVTNREQNST 558
            ||.:....:..:|.|.|       :.|...:|.    .|.|   |..|:.|....|......:.|
plant   725 HPALSEFPSNSFYEGTLQNGVTIIERQTTGIDF----PWPV---PNRPMFFYVQLGQEEISASGT 782

  Fly   559 SSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKG------YPNVEVGSV 617
            |..|..||..:...|...:...||..: :|::.||..|...:...:...|      |..:||.||
plant   783 SYLNRTEAANVEKLVTAFLKSGVVPSQ-IGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASV 846

  Fly   618 ETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSDFKFVINE 680
            :::|||||..||.|.|:|  ...:||:.:|||:||.|:||:..::::|||..|.....:..::..
plant   847 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTH 911

  Fly   681 CKKH 684
            .|:|
plant   912 YKEH 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 79/267 (30%)
DNA2 <388..684 CDD:440729 97/312 (31%)
LBA1NP_199512.2 UPF1_Zn_bind 138..291 CDD:401391 5/22 (23%)
1B_UPF1-like 344..431 CDD:394815 21/94 (22%)
TIGR00376 437..920 CDD:273041 144/542 (27%)
DEXXQc_UPF1 488..723 CDD:350797 79/269 (29%)

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