DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mov10 and upf1

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_998639.1 Gene:upf1 / 406783 ZFINID:ZDB-GENE-040426-2836 Length:1100 Species:Danio rerio


Alignment Length:465 Identity:140/465 - (30%)
Similarity:211/465 - (45%) Gaps:74/465 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIA 315
            |..|:.||:.::..|.:    ::.||||||||.|....:..| .:|....:||.|.||.|.|.:.
Zfish   452 NHSQVYAVKTVLQRPLS----LIQGPPGTGKTVTSATIVYHL-ARQGNGPVLVCAPSNIAVDQLT 511

  Fly   316 LKLCEYIESNIRLQEHFAQQKLPEPD-----HQLIRVYSRSIYEKGFASVPSL----LLKN---- 367
            .|:.:.....:||... :::.:..|.     |..||         ...|:|.|    .||:    
Zfish   512 EKIHQTGLKVVRLCAK-SREAIDSPVSFLALHNQIR---------NMDSMPELQKLQQLKDETGE 566

  Fly   368 -SNCSKSIYDHIK--ASR--IVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEAL 427
             |:..:..|..:|  |.|  ::...:|   .||........|.:.. |..|.|||:..:||||.:
Zfish   567 LSSSDEKRYRALKRTAERELLMNADVI---CCTCVGAGDPRLAKMQ-FRSILIDESTQATEPECM 627

  Fly   428 IG-IMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQ 491
            :. ::|.||     :||.|||.|||.|:...:||..|||:||.|||:....            |.
Zfish   628 VPVVLGAKQ-----LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGI------------RP 675

  Fly   492 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMD---VNLAANWSVLTNPQFPIIFQATHGVTNR 553
            :||...||.||.:....:.::|.|.|:....|.|   ......|   ..|..|:.|..|.|....
Zfish   676 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQW---PQPDKPMFFYVTQGQEEI 737

  Fly   554 EQNSTSSYNNLEAEVICWYVKRLINDRVVG--QEDVGIVAPYTAQGKLVTKLLQSKG------YP 610
            ..:.||..|..||..:.....||:.   .|  .:.:||:.||..|...:.:.:|..|      |.
Zfish   738 ASSGTSYLNRTEAANVEKITTRLLK---AGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQ 799

  Fly   611 NVEVGSVETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSD 673
            .||:.||:.:|||||..||.|.|::  ...:||:.:|||:||.|:||:..:|:||||..|.....
Zfish   800 EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPL 864

  Fly   674 FKFVINECKK 683
            :..::|..|:
Zfish   865 WNHLLNYYKE 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 78/266 (29%)
DNA2 <388..684 CDD:440729 100/310 (32%)
upf1NP_998639.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..67
UPF1_Zn_bind 100..251 CDD:401391
C3H. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 102..134
CC/SHH/C. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 116..144
C4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01341 162..192
1B_UPF1-like 304..393 CDD:394815
TIGR00376 358..880 CDD:273041 140/465 (30%)
DEXXQc_UPF1 450..683 CDD:350797 78/266 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 978..1065
Blue background indicates that the domain is not in the aligned region.

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