DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mov10 and hrr1

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_588411.2 Gene:hrr1 / 2539248 PomBaseID:SPCC1739.03 Length:999 Species:Schizosaccharomyces pombe


Alignment Length:920 Identity:186/920 - (20%)
Similarity:301/920 - (32%) Gaps:366/920 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RELPYYPPSNEMIEANTNQDLSANNSVFGDFMKTKRLEFYNVCSVMQTLLTIDDLSNMELYAQLI 66
            ||||..|...|:  .:.:.:|.:|| ::|.:   |..|.|                 :.::.:|:
pombe   131 RELPSIPTLEEL--TSKSVELPSNN-IYGGY---KSFEDY-----------------LSIHYRLL 172

  Fly    67 QSD-VPVQRVSKLTYK-----ITFKSTPVN----------AEDFVAPNLDQVVLVPK-------- 107
            :.| |...|.|.|.||     ||..|..|.          :...:|..|...|...|        
pombe   173 REDAVSPLRESVLRYKVNPNYITGSSLAVYDHVRIDGYTISSSVIAAKLSFSVRAKKKIKWATSR 237

  Fly   108 --------------------ASLLASPLPKQLVLALLPHPHE----------DLEPGDPML---- 138
                                .::.|.||.     .|..||||          .|:|.:..:    
pombe   238 RLISGSLVLLSNDDFQTFRIGTVCARPLS-----GLNKHPHEIDVKFEDISISLDPREEYVMIEA 297

  Fly   139 --------RHV-ASVDKVSSTTVHVRFSRKHKAVLSGQRFYAIIRSRRLTIRYMYRALNLLQESP 194
                    :|| .|:.::|::|..::....|            .:|.:.|.::       :|.:|
pombe   298 TSGYWEAYKHVLRSLQRLSASTFPMKDYLVH------------CKSNQETAKH-------IQNNP 343

  Fly   195 LVRRYLFPFPSWLTQLVDNSQIKVCCDGHLPNWMQGRPQEPATPTSLSLLNSTIYSNAEQLEAVQ 259
            .:|         :..::.|:..|:.           ...||..|....|       ::.||:|.|
pombe   344 RIR---------INSILKNNSQKIV-----------NALEPFGPGEYIL-------DSSQLKAYQ 381

  Fly   260 RIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSR---ILVTAGSNSACDTIALKLCEY 321
            .::    |:...|:.|||||||:...::||..| |:...|.   |||...:|.|.|.|.::|...
pombe   382 SML----TKRLSIIQGPPGTGKSFVTLKAIETL-LENTHSHVLPILVACQTNHAVDQILIRLLHQ 441

  Fly   322 IESNIRLQEHFAQ---------QKLPEPDHQLIRVYSR--------------------------- 350
            ..|.:||......         ||.....|.....|:.                           
pombe   442 GASVMRLGSRTKDPEIAAVTIFQKAKHTKHSFKAAYNEIRHKKQRLIKQITNIMHNFNLEFVTLS 506

  Fly   351 SIYEKGFASVPSL--LLKNSNCSKSIYDH--------------------IKASRIV--------- 384
            .::.||..:...|  |..|:....|:.::                    |..|.|.         
pombe   507 YLHSKGIITTSQLESLRNNTEWISSVAENGEKTEEELISIWLGDAKVELITPSEITDGFEEELQI 571

  Fly   385 --------------------------------KYGIIVATLCTVARLVTDTL------------- 404
                                            ||  :.:.|.|:.....|||             
pombe   572 DPEKLEEIQKEAEDSGALMEEELRGKFINLRCKY--LFSKLTTLHEKEIDTLLTIPNIWDIPEYS 634

  Fly   405 ---------------------GRYNFFTHIFIDEAGASTEPEALI----GIMG------------ 432
                                 ..|.|:..:..:..|.|.:..|::    .::|            
pombe   635 RGIIYCRWLESAYAAAEKELNRLYRFYLKVDRERIGFSNKRAAILLRGANVIGMTTTGLNKYRDI 699

  Fly   433 ----------IKQTADC--------------HVILSGDHKQL--GAVIKSNRAASLGLSRSLMER 471
                      |::.||.              .::|.||||||  |....:.|.....||.|:.||
pombe   700 LERINPKICFIEEAADVLEGPIIPAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFER 764

  Fly   472 LLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSVLT 536
            |:::|.            ...||....|.||||.||.:.:|.:        ..|..:...|    
pombe   765 LVENDM------------EYTRLTMQRRMHPQIRRLVSSVYED--------LSDYEITKYW---- 805

  Fly   537 NPQFPII-----FQATHGVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQ 596
             |..|.:     |..||..........|..|..||:::..:...|||:.|..|: :..:..|.||
pombe   806 -PSIPGMGEIRRFFLTHSRIEDNDGFASKINLFEAQMLVQFAVYLINNGVEPQK-ITCLTFYAAQ 868

  Fly   597 GKLVTKLL-----QSKGYPNVEVGSVETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNVLLSR 654
            ..|:.:||     :.|.:  ::|.:|:.|||.|..:::.|||::  .|.:||:.:|.||.|.|||
pombe   869 KDLIERLLSESLNREKHF--IKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSR 931

  Fly   655 AKALLILVGN 664
            |:..|.:.||
pombe   932 ARRGLFIFGN 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 76/425 (18%)
DNA2 <388..684 CDD:440729 86/365 (24%)
hrr1NP_588411.2 DEAD-like_helicase_N 372..>469 CDD:475120 32/108 (30%)
DEAD-like_helicase_N <682..779 CDD:475120 22/108 (20%)
SF1_C_Upf1 781..959 CDD:350195 53/177 (30%)

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