DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mov10 and Upf1

DIOPT Version :10

Sequence 1:NP_611185.3 Gene:Mov10 / 36922 FlyBaseID:FBgn0034187 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_322028.5 Gene:Upf1 / 1282033 VectorBaseID:AGAMI1_014598 Length:1161 Species:Anopheles gambiae


Alignment Length:650 Identity:170/650 - (26%)
Similarity:264/650 - (40%) Gaps:145/650 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 GDPM-LRHVASVDKVSSTTVHV-------------RFSRKHKAVLSGQRFYAIIRSRRLTIRYMY 184
            ||.: ||:|..:.|..|...||             .....|:|        .|.|:...::.:::
Mosquito   344 GDELKLRYVGELHKPWSCIGHVIKVPDNYGDDVGLELKHNHQA--------PIERTSNFSVDFIW 400

  Fly   185 RALNLLQESPLVRRYLFPFPSWLTQLVDNSQIKVCCDG--------HLPNWMQGRPQEPATPTSL 241
            :..:..:....:|::.....|....:.......|..||        :||.....    |..|.  
Mosquito   401 KGTSFERMQQALRKFAMDAKSVSNYIYARLLGNVRADGAEEVLFRLNLPKHFSA----PNLPD-- 459

  Fly   242 SLLNSTIYSNAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQL-RLQQPQSRILVTA 305
                    .|..|:.||:..:..|.:    ::.||||||||.|....:.|| ||.  ...|||.|
Mosquito   460 --------LNRSQVYAVRHALQRPLS----LIQGPPGTGKTVTSATIVYQLARLN--SGPILVCA 510

  Fly   306 GSNSACDTIALKLCEYIESNIRLQEHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPSLL------ 364
            .||:|.|.:.                   :|:...:.:::||.:||  .:...|..|.|      
Mosquito   511 PSNTAVDQLT-------------------EKIHRTNLKVVRVCARS--REAIDSPVSFLALHNQI 554

  Fly   365 --------------LKNSNCSKSIYDHIKASRIVKYG---IIVAT---LCTVARLVTDTLGRYNF 409
                          ||:.....|:.|..:...:.|..   ::.|.   .||........|.|.. 
Mosquito   555 RNMAQNSELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADVICCTCVGAGDLRLQRIK- 618

  Fly   410 FTHIFIDEAGASTEPEALIG-IMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLL 473
            |..|.|||:..|||||.::. ::|.||     :||.|||.|||.|:...:||..|||:||.|||:
Mosquito   619 FNSILIDESMQSTEPECMVPVVLGAKQ-----LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV 678

  Fly   474 QSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAAN--WSVLT 536
            ....            |..||...||.||::.:..:..:|.|.|:....|.:..|..:  |   .
Mosquito   679 ALGI------------RPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPW---P 728

  Fly   537 NPQFPIIFQATHGVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVT 601
            :|..|:.|..|.|......:.||..|..||..:.....|.:. ..:..:.:||:.||..|...:.
Mosquito   729 SPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLK-AGIKPDQIGIITPYEGQRAYLV 792

  Fly   602 KLLQ------SKGYPNVEVGSVETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNVLLSRAKAL 658
            :.:|      ||.|..:|:.||:.:|||||.|||.|.|::  ...:||:.:|||:||.|:|||..
Mosquito   793 QYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTRAKYG 857

  Fly   659 LILVGNPVTLRHHSDFKFVINECKKHGTYLLKKRDSGQRPHILIKADESNEESSSEPEDEDDKLI 723
            :|:||||..|.....:..::|      .|..||        :|::...:|.:.|.....:..|:|
Mosquito   858 IIIVGNPKVLAKQELWNHLLN------FYKDKK--------VLVEGSLNNLKESMIQFTKPKKII 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mov10NP_611185.3 DEXXQc_Helz-like 251..499 CDD:350796 79/275 (29%)
DNA2 <388..684 CDD:440729 101/309 (33%)
Upf1XP_322028.5 None

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