DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and erlin1

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001014325.1 Gene:erlin1 / 541490 ZFINID:ZDB-GENE-050327-13 Length:342 Species:Danio rerio


Alignment Length:179 Identity:33/179 - (18%)
Similarity:71/179 - (39%) Gaps:34/179 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 EFVSNMLERAKEEIFHARDDIYRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQIL-QNMGTRP 381
            |.|:.::..:..:|.......|.:.|:..|:...|  |.|..:...|.:...|..|: :|:.|..
Zfish    90 EVVNMLIPTSVVDIVRNYTADYDKTLIFNKIHHEL--NQFCSVHTLQEVYIELFDIIDENLKTAL 152

  Fly   382 NKKVYERKIRLCQEILLVLKVVTPGISRLKAIAL------------YELANTQAELARKMYTEME 434
            .|.               |..:.||:: ::|:.:            |||  .:||..|.:.|...
Zfish   153 QKD---------------LNCMAPGLT-IQAVRVTKPKIPEAIRRNYEL--MEAEKTRLLITVQT 199

  Fly   435 HSANDLLAELERVEVMLRESLRMLLFEPLATPEGQLTRSMLRELKELQD 483
            ....:..||.||.:.:: |:.::.....:...:..:.:...:::.|::|
Zfish   200 QKVVEKEAETERKKAII-EAQKVAQVAEIQFQQKVMEKETEKKISEIED 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997
erlin1NP_001014325.1 SPFH_like_u3 16..308 CDD:259804 33/179 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..342
Blue background indicates that the domain is not in the aligned region.

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