DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and Smyd5

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001101340.1 Gene:Smyd5 / 312503 RGDID:1309153 Length:417 Species:Rattus norvegicus


Alignment Length:388 Identity:82/388 - (21%)
Similarity:124/388 - (31%) Gaps:133/388 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRFAVALCNVRAGETLLLENPIVVLPLMGE-----RRCSKCFNLTE------------------- 61
            |.||..|  :|.|||:.:|.|:|....:..     |.|..|....|                   
  Rat    35 GLFATQL--IRKGETIFIERPLVASQFLWNALYRYRACDHCLRALEKAEENAQRLTGKPGQVLPH 97

  Fly    62 -------------------SFC-RKCRLLA-------LCEDCSDHDER-DCKRLAE----MNFSD 94
                               ::| .:|||.|       ||...|..|.| ...:|.|    :::..
  Rat    98 PELCSVRKDLHQNCPRCQVTYCSAECRLAAAEQYHQILCPGPSQDDPRHPLNKLQEAWRSVHYPP 162

  Fly    95 DQVELL------------QKKEHTEIQPVLKCLLLREHEETL--PLYEEMSQMDSQLMTRRGTEV 145
            :...::            :.|:|........|......||.:  .|..:..:...:|:.|..||.
  Rat   163 ETASIMLMARMVATVKQAKDKDHWVRLFSHFCSKTANEEEEIVHKLLGDKFKGQLELLRRLFTEA 227

  Fly   146 WKNYQE---HAFTPLDYGGVLAQL----RGAADEDLVQGLLGILDINAYEIRAPE---VGGAMRG 200
            .  |:|   ..|||..:..:.|.:    :|.....|.|   .:...:|.|::..|   :...:..
  Rat   228 L--YEETLSQWFTPDGFRSLFALVGTNGQGIGTSSLSQ---WVHACDALELKPQEREQLDTFIDQ 287

  Fly   201 LYR-------------RAGLFA------HSCTPNLVISIDDEQ-RIKVYANRFIAAGEILYNCYT 245
            ||:             .:|||.      |||.||...|..:.. .:.|.|...|..||.:...|.
  Rat   288 LYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFLLHVTALEDIEPGEEICISYL 352

  Fly   246 NVL---LGTEERRKILKVGKCFDCSCPRC----QDP-------------------TELGTHMS 282
            :..   .....|.|||:....|.||||:|    .||                   .|||..|:
  Rat   353 DCCQRERSRHSRHKILRENYLFVCSCPKCLAEADDPNVTSEEEEEEDEEEGEPEDAELGDEMT 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 29/111 (26%)
Smyd5NP_001101340.1 SET_SMYD5 22..384 CDD:380919 76/355 (21%)
zf-MYND 101..136 CDD:480929 5/34 (15%)

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