DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF2 and arhgef3

DIOPT Version :10

Sequence 1:NP_477317.1 Gene:RhoGEF2 / 36915 FlyBaseID:FBgn0023172 Length:2559 Species:Drosophila melanogaster
Sequence 2:XP_005161924.2 Gene:arhgef3 / 570228 ZFINID:ZDB-GENE-050208-773 Length:520 Species:Danio rerio


Alignment Length:445 Identity:96/445 - (21%)
Similarity:182/445 - (40%) Gaps:80/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1520 WSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFP 1584
            ||......:...|:..|.||||.|.|:.|.|::.:..|||..:.:..|:.:..::::..|..:| 
Zfish   125 WSETFDVGLGHMLSSKEIKRQEAIFELSQGEQDLIEDLKLAKKAYHDPMLKLCIMTEHELNQIF- 188

  Fly  1585 PALLSLREIHGAFEQSLKQRRIEHNHVVNT--IGDLLADMFDGQSGVVLC-EFAAQFCARQQIAL 1646
            ..|.||..:|   |..|.:.|...|...:|  :|.:|.....       | |....:|: .|:|.
Zfish   189 GTLDSLIPLH---EDLLSRLRDVRNPDGSTDHMGHILVHWLP-------CLETYNSYCS-NQVAA 242

  Fly  1647 EALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPENTT 1711
            :||.:.:.:|..:...|::.......|:|:|.:.|.....||.|||||...:.|.|    |....
Zfish   243 KALLDHKKQDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILKHT----PNEHP 303

  Fly  1712 EAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEEFKKLDLTQHHLIHDGNL 1776
            :.:.:..|:...:.|:..:|  .:|.|            ....|.||....|:..|..|:.:.:.
Zfish   304 DRQHLDEAINMIQSIVARIN--TQTGE------------SECRYYKERLLYLESGQRDLLIESSR 354

  Fly  1777 ------TIKKNPSVQLHGLLFENMIVL---LTKQDDKYYLKNLHTPLSITNKPVSPIMSIDADTL 1832
                  .:|.|..|:||..||::::|:   ::..:..:|        .:..:|: |:..::.:.|
Zfish   355 ILICHGELKNNRGVKLHVFLFQDVLVITRAISHNEQLWY--------QLYRQPI-PVRDLEWEDL 410

  Fly  1833 ----------IRQEAADK---NSFFLIKMK---TSQMLELRAPSSSECKTWFKHFSDVAARQSKN 1881
                      ||...::.   .:||.:..:   .:||...:|..:...:.|..     ..||:|.
Zfish   411 QDGEMRVGGSIRGAFSNNERTKNFFRVMFRCGGQTQMHCFQASDTFNKQQWLN-----CIRQAKE 470

  Fly  1882 RSKNASSNHDTSISDPAL-AAIPHSNTKESLELSTDTVQPLAATATLTTTPLAPM 1935
            ...:|.|....|   |.: ....|::..:::|.|:.....:    .|...|::|:
Zfish   471 AVGSAESEPPRS---PQMDRERQHNDCSDTMEDSSSEYPQM----ELADIPVSPV 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF2NP_477317.1 PDZ_ARHGEF11-12-like 258..333 CDD:467282
RGS_GEF_like 934..1055 CDD:188710
C1_ARHGEF-like 1150..1202 CDD:410382
RhoGEF 1539..1731 CDD:238091 49/194 (25%)
PH_16 1756..1876 CDD:436083 25/144 (17%)
arhgef3XP_005161924.2 None
Blue background indicates that the domain is not in the aligned region.

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