DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-4 and ATP6V0B

DIOPT Version :10

Sequence 1:NP_611169.1 Gene:Vha16-4 / 36900 FlyBaseID:FBgn0262513 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001281262.1 Gene:ATP6V0B / 533 HGNCID:861 Length:261 Species:Homo sapiens


Alignment Length:145 Identity:50/145 - (34%)
Similarity:83/145 - (57%) Gaps:12/145 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LGAVCAIVFSTLGAAYGTAKASVGISSMSIKHPQLIMKAIVPVVMAGIIAIYGLVIAVLLAGSLS 81
            ||...||..|.:|||:|.......|....:|.|::..|.:|.::....:||||:::|:::: :::
Human    52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVIS-NMA 115

  Fly    82 SPYSA-----------YKGFLNLSAGLAVGVSGMGAGIAIGVVGEAGVRASAQQPKLFVAIILIL 135
            .|:||           :.|:....|||.||:|.:..|:.:|:||.....|.||.|.|||.|:::.
Human   116 EPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVE 180

  Fly   136 IFAEVLGLYGLIVAI 150
            ||...:||:|:||||
Human   181 IFGSAIGLFGVIVAI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-4NP_611169.1 PRK13469 13..118 CDD:469780 33/111 (30%)
ATP-synt_Vo_c_ATP6C_rpt2 87..153 CDD:349416 28/64 (44%)
ATP6V0BNP_001281262.1 ATP-synt_Vo_c_ATP6F_rpt1 49..111 CDD:349417 19/58 (33%)
ATP-synt_Vo_c_ATP6F_rpt2 133..197 CDD:349418 28/63 (44%)

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