DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sod2 and MRP1

DIOPT Version :10

Sequence 1:NP_476925.1 Gene:Sod2 / 36878 FlyBaseID:FBgn0010213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_010634.3 Gene:MRP1 / 851948 SGDID:S000002755 Length:321 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:38/197 - (19%)
Similarity:60/197 - (30%) Gaps:75/197 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 NHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLA 154
            |.||..:.|    |..::.|:.|:.|.:.||.||:..|....:|:.|.|:.||...::..|..:.
Yeast   123 NRTISNEPL----TTGNERLQAALISSFGSLMEFRTLLINSNLAISGDGFTWLVARRQLDKRAMR 183

  Fly   155 -ALPNQD----------------PLEAST------------------------------------ 166
             .:||:|                |...||                                    
Yeast   184 NDMPNRDIEYDKLFILNTYNAGTPFNFSTSGVMNELNNQYTNMEKQRAKEAGNLEDSEMTAKQAK 248

  Fly   167 -----------------GLIPLFGIDVWEHAYYLQYKNV-RPSYVEAIWDIANWDDISCRFQEAK 213
                             ..|||..||.....:...|... :..|:|.:||...|..:..|..:..
Yeast   249 TKFIYETQQKGFSGKEVSYIPLLAIDASPKTWLTDYGVFGKREYLERVWDSIEWKIVESRLPQRT 313

  Fly   214 KL 215
            |:
Yeast   314 KI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod2NP_476925.1 SodA 20..206 CDD:440370 36/186 (19%)
MRP1NP_010634.3 SodA <56..>207 CDD:440370 22/87 (25%)
Sod_Fe_C 137..308 CDD:460691 31/170 (18%)

Return to query results.
Submit another query.