DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sod2 and FSD3

DIOPT Version :10

Sequence 1:NP_476925.1 Gene:Sod2 / 36878 FlyBaseID:FBgn0010213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_197722.1 Gene:FSD3 / 832395 AraportID:AT5G23310 Length:263 Species:Arabidopsis thaliana


Alignment Length:224 Identity:68/224 - (30%)
Similarity:105/224 - (46%) Gaps:24/224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RKISQTASLAVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKS 69
            |.:.....|.|...:.|...||...||||.:.|..:|:|..|||:.||:|||   :||    .|.
plant    36 RSLRSRGGLKVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLN---KQL----GKD 93

  Fly    70 D------TTKLIQLA-----PALRFNGGGHI-NHTIFWQNLSP-NKTQPSDDLKKAIESQWKSLE 121
            |      ..:||:..     |...||....: ||..||:::.| ....|...:.:.|:..:.|..
plant    94 DRLYGYTMEELIKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFT 158

  Fly   122 EFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQ-DPLEASTGLIPLFGIDVWEHAYYLQY 185
            .|:::.|...:...||||.||...::..:|::....|. :||....  ||:..:|||||:|||.|
plant   159 NFREKFTNAALTQFGSGWVWLVLKREERRLEVVKTSNAINPLVWDD--IPIICVDVWEHSYYLDY 221

  Fly   186 KNVRPSYVEAIWD-IANWDDISCRFQEAK 213
            ||.|..|:....: :.:|:....|...|:
plant   222 KNDRAKYINTFLNHLVSWNAAMSRMARAE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod2NP_476925.1 SodA 20..206 CDD:440370 63/200 (32%)
FSD3NP_197722.1 PLN02622 1..263 CDD:166263 68/224 (30%)

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