DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG15617 and Pdzd11

Sequence 1:NP_611151.1 Gene:CG15617 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001100415.1 Gene:Pdzd11 RGDID:1560007 Length:140 Species:Rattus norvegicus

Alignment Length:124 Identity:29/125 (23%)
Similarity:52/125 (42%) Gaps:21/125 (17%)


  Fly     7 RVPKYDS------DAFDNVA-------------YELQMTYTLETDCRIMSFYDAMWGMEVTGGID 52
            |:| ||.      .|::|..             |..::|..|.....:.....|..|..:.||..
  Rat     4 RIP-YDDYPVVFLPAYENPPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGGKA 67

  Fly    53 QFEPLTIVNVSPTGLAKRGGMRVGDEITQINDVPALEMTFNEALQMFRKNSRYVRVYVR 111
            ....:.|..|.|...|.|.|::.||::..:|||...::..::|:::. |.:|.:.:.||
  Rat    68 SQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEIL-KTAREISMRVR 125

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 19/81 (23%)
Pdzd11NP_001100415.1 PDZ_signaling 45..125 CDD:238492 19/81 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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