DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Idgf6 and AT4G19740

Sequence 1:NP_001286499.1 Gene:Idgf6 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_193709.3 Gene:AT4G19740 AraportID:AT4G19740 Length:211 Species:Arabidopsis thaliana

Alignment Length:204 Identity:55/205 (27%)
Similarity:90/205 (44%) Gaps:48/205 (23%)


  Fly   139 TGRTRFVNTVYSLVKTYGFDGLDVAWQFPKNKPKKVHSGIGSL---WKGFKKVFSGDSIVDEKSE 200
            |.|..|:::..|:.::.||.|||:||::|.|..:.  :..|.|   |:         |.|:.:|:
plant     6 TSRESFISSSISIARSLGFYGLDLAWEYPNNDVEM--NNFGKLLQEWR---------SAVEVESQ 59

  Fly   201 EHKEQFTALLRDVKNAFRPDNLLLSTTVLPNVN-SSLFYDIPAVVNYLDFVNLGTFDFF--TPQR 262
                         :...||  |||:..|....: :|:.|.:.|:...||:|||..::|:  |.:.
plant    60 -------------RTGIRP--LLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTEI 109

  Fly   263 NPEVADYAAPIYELSERNPEFNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTGVPPV 327
            .|     .|.:|:.|.:.|..:..  :|:||:...|..|...|....|..|.|.||         
plant   110 GP-----PAGLYDPSIKGPCGDTG--LKHWLKAGLPEKKAVFGFPYVGWSWTLDDD--------- 158

  Fly   328 KDVKDEAPV 336
            ||..|:..|
plant   159 KDHGDDVAV 167

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 55/205 (27%)
Glyco_18 31..429 CDD:214753 55/205 (27%)
AT4G19740NP_193709.3 Glyco_18 <23..211 CDD:214753 51/188 (27%)
GH18_chitinase-like <23..211 CDD:299167 51/188 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11177
Phylome 1 0.910 0.615 Consistency score
22.010

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