DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf6 and Chit1

DIOPT Version :10

Sequence 1:NP_477081.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:473 Identity:126/473 - (26%)
Similarity:218/473 - (46%) Gaps:119/473 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVSLCLASI---------QASKVGAPQLPKKHLVCYYDSASFVKEGLGKLVIDELEPALQFCDYL 63
            :.||.||.:         .|:|          |.||:.:.:..:.|..:.:..:::|.|  |.::
  Rat     2 VQSLALAGVTTLLMIQWGSAAK----------LFCYFTNWAQYRSGAARFLPRDVDPNL--CTHV 54

  Fly    64 VYGYAGIERDSHKAVSLNQQLDLDLGKGLYRTVTRLKRKYPNVKILLSVGGDKDIELDKDAKELP 128
            :|.:||:.......|..|.:|       .|:.:..||::.|.:|.||:|||         .....
  Rat    55 IYAFAGLNNHQVSTVEPNDEL-------FYQELNSLKKRNPKLKTLLAVGG---------WSFGT 103

  Fly   129 NKYLELLESPTGRTRFVNTVYSLVKTYGFDGLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDS 193
            .|:.:::.:.:.|..|||:..|.::|:||||||:.|::|.::                    |..
  Rat   104 QKFTDMVATASTRQTFVNSALSFLRTHGFDGLDLDWEYPGSR--------------------GSP 148

  Fly   194 IVDEKSEEHKEQFTALLRDVKNAFRPD------NLLLSTTVLP----NVNSSLFYDIPAVVNYLD 248
            .||      ||:||||::|:..||:.:      :.||.|..:|    :|::.  |::..:|..||
  Rat   149 AVD------KERFTALIQDLAKAFQEEARASGKSRLLLTAAVPTGRGHVDAG--YEVDKIVQSLD 205

  Fly   249 FVNLGTFDFFTPQRNPEVADYAAPIYEL---SERNPEFNVAAQVKYWLRNNCPASKINVGVATYG 310
            |:||..:||.:..  .:...:.:|:|:.   :.::.|.||.|.|..||:...||||:.:|:..||
  Rat   206 FINLMAYDFHSSW--DKTTGHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLGMPAYG 268

  Fly   311 RPWKLTDDSGDTGVPPVKDVKDEAPV------GGNTQVPGIYSWPEVCALLPNQNNAYLKGANAP 369
            |.:.|. .|.|:||        .||.      |..|:..||..:.|||:....|           
  Rat   269 RSFTLA-SSSDSGV--------GAPATGPGAPGPYTKEKGILVYFEVCSWKGKQ----------- 313

  Fly   370 LIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPDTAADKAGYVRTENLGGVALFDLSYDDFRG- 433
              :::|....:.|        :|:.  ||.|:|.::...||.||:.:.|||..::.|..|||:| 
  Rat   314 --RIEDQKVPYVS--------QGNQ--WVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGS 366

  Fly   434 LCTNEKYPILRAIKYRLT 451
            .|...:||::|.:...|:
  Rat   367 FCNEGQYPLIRTLHQELS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_477081.1 GH18_IDGF 30..450 CDD:119352 119/439 (27%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 119/438 (27%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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