DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and cht-1

DIOPT Version :10

Sequence 1:NP_477081.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:440 Identity:112/440 - (25%)
Similarity:186/440 - (42%) Gaps:95/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLD---LGKGLYR 94
            ||:.:.:..::|..|.|.::..|.|  |.::::.:..:..|  ..|......||.   .|:|:||
 Worm    57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNAD--YTVRAYDPADLPNDWAGEGMYR 117

  Fly    95 TVTRLKRKYPNVKILLSVGG-DKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFD 158
            .|.:||.....:|.|||.|| .....|          :..:..|...|..|:::..:.|:|:|||
 Worm   118 RVNKLKVTDTQLKTLLSFGGWSFGTAL----------FQGMAASSASRKVFIDSAITFVRTWGFD 172

  Fly   159 GLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFR----- 218
            |:|:.|::|        ||...:                      ..:.||::::|.|..     
 Worm   173 GIDIDWEYP--------SGATDM----------------------ANYVALVKELKAACESEAGS 207

  Fly   219 --PDNLLLSTTVLPN-VNSSLFYDIPAVVNYLDFVNLGTFDFFTPQRNPEVADYAAPIYELSERN 280
              .|.||::..|... ......||||.:....||:.|.::|||....:  :..:.:|:|..:|..
 Worm   208 TGKDRLLVTAAVAAGPATIDAGYDIPNLAPNFDFILLMSYDFFGAWAS--LVGFNSPLYATTELP 270

  Fly   281 PE---FNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDS----GDTGVPPVKDVKDEAPVGG 338
            .|   :||.:..:||.:...|..||.||:.||||.|.|.:.|    |.:|.|        |.:..
 Worm   271 AEWNGWNVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAINPGTSGSP--------AKITQ 327

  Fly   339 NTQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDP 403
            ..|..|:.::.|.|.:|.|....|....:.....||                 |:.  |.|::|.
 Worm   328 YVQEAGVGAYFEFCEMLANGATRYWDSQSQVPYLVQ-----------------GNQ--WWSYDDE 373

  Fly   404 DTAADKAGYVRTENLGGVALFDLSYDDFRGLCTN---EKYPILRAIKYRL 450
            ::.|:|..||:.|..||..::.|.:|||...|:|   :.||::..|...|
 Worm   374 ESFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKEL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_477081.1 GH18_IDGF 30..450 CDD:119352 111/438 (25%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 111/438 (25%)
CBM_14 481..532 CDD:426342
CBM_14 567..615 CDD:426342
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.