DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and cht-1

DIOPT Version :9

Sequence 1:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:440 Identity:112/440 - (25%)
Similarity:186/440 - (42%) Gaps:95/440 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLD---LGKGLYR 94
            ||:.:.:..::|..|.|.::..|.|  |.::::.:..:..|  ..|......||.   .|:|:||
 Worm    57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNAD--YTVRAYDPADLPNDWAGEGMYR 117

  Fly    95 TVTRLKRKYPNVKILLSVGG-DKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFD 158
            .|.:||.....:|.|||.|| .....|          :..:..|...|..|:::..:.|:|:|||
 Worm   118 RVNKLKVTDTQLKTLLSFGGWSFGTAL----------FQGMAASSASRKVFIDSAITFVRTWGFD 172

  Fly   159 GLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFR----- 218
            |:|:.|::|        ||...:                      ..:.||::::|.|..     
 Worm   173 GIDIDWEYP--------SGATDM----------------------ANYVALVKELKAACESEAGS 207

  Fly   219 --PDNLLLSTTVLPN-VNSSLFYDIPAVVNYLDFVNLGTFDFFTPQRNPEVADYAAPIYELSERN 280
              .|.||::..|... ......||||.:....||:.|.::|||....:  :..:.:|:|..:|..
 Worm   208 TGKDRLLVTAAVAAGPATIDAGYDIPNLAPNFDFILLMSYDFFGAWAS--LVGFNSPLYATTELP 270

  Fly   281 PE---FNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDS----GDTGVPPVKDVKDEAPVGG 338
            .|   :||.:..:||.:...|..||.||:.||||.|.|.:.|    |.:|.|        |.:..
 Worm   271 AEWNGWNVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAINPGTSGSP--------AKITQ 327

  Fly   339 NTQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDP 403
            ..|..|:.::.|.|.:|.|....|....:.....||                 |:.  |.|::|.
 Worm   328 YVQEAGVGAYFEFCEMLANGATRYWDSQSQVPYLVQ-----------------GNQ--WWSYDDE 373

  Fly   404 DTAADKAGYVRTENLGGVALFDLSYDDFRGLCTN---EKYPILRAIKYRL 450
            ::.|:|..||:.|..||..::.|.:|||...|:|   :.||::..|...|
 Worm   374 ESFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKEL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 111/438 (25%)
Glyco_18 31..429 CDD:214753 103/414 (25%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 111/438 (25%)
Glyco_18 57..399 CDD:214753 103/414 (25%)
CBM_14 481..532 CDD:279884
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.