Protein Alignment Idgf6 and lmd-4

DIOPT Version :9

• Sequence 1: NP_001286499.1
• Gene: Idgf6 / 36868
• FlyBaseID: FBgn0013763
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_504862.2
• Gene: lmd-4 / 179121
• WormBaseID: WBGene00017233
• Length: 2011
• Species: Caenorhabditis elegans
• Alignment Length: 467
• Identity: 104/467 - (22%)
• Similarity: 180/467 - (38%)
• Gaps: 124/467 - (26%)

  Fly    19 SKV----GAPQLPK----KHLVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSH 75
            |||    |...||.    |.:|.||       .|.|...|.|.:  |:...::::.:..:..|.
 Worm  1461 SKVEEPTGKSSLPAASCGKRIVGYY-------TGWGDREITENQ--LKKLTHVIFAFVAMYEDG- 1515

  Fly    76 KAVSLNQQLDLDLG----KGLYRTVTRLKRK----YPNVKILLSVGGDKDIELDKDAKELPNKYL 132
             :|......:.|.|    |...|....:|:|    ...|::|.:|||..:           ::|.
 Worm  1516 -SVKFGAVSEDDSGPQAAKKAERRFLNMKKKARAANSGVRVLFAVGGWDN-----------SQYF 1568

  Fly   133 ELLESPTG-RTRFVNTVYSLVKTYGFDGLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVD 196
            ..:.:.:| |.:||:::.|.|:....||:|:.|::|.:..|...:.: .|.|..::.||..:
 Worm  1569 SSVAADSGKRKKFVDSIASFVEDQKIDGVDLDWEYPDSNGKDAKNHV-QLIKEIREKFSEMA--- 1629

  Fly   197 EKSEEHKEQFTALLRDVKNAFRPDNLLLSTTVLPNVNSSLFYDIPAVVNYLDFVNLGTFDFF--- 258
             |.::.|:.:...|......:               |....||:..::.|.||:|:.|:|::
 Worm  1630 -KKKKRKDPYVITLASAAGEW---------------NLRKGYDLKGILKYADFINVMTYDYYGAW 1678

  Fly   259 ---------TPQRNPEVADYAAPIY--ELSERNPEFNVAAQVKYWLRNNCPASKINVGVATYGRP 312
                     ||          ||:|  .|...:.:.|....:|::.......|::|:||..|||.
 Worm  1679 ESKWGAYTGTP----------APLYFGSLKGFSGKLNADFSMKFYACKTEKPSQLNMGVPFYGRY 1733

  Fly   313 WKLTDDSGDTGVPPVKDVKDE-----APVGGNTQVPGIYSWPEVCALLPNQNNAYLKGANAPLIK 372
            ||       ..:.|: |..|.     ||..|..: .|...|..:.      ...:.||:.:...|
 Worm  1734 WK-------NVLGPI-DKSDNMWRTAAPQNGKYE-GGYVGWRNLA------KEGWNKGSASWHEK 1783

  Fly   373 VQDPAKRFGSYAYRAADKKGDNGIWVSFEDPDTAADKAGYVRTENLGGVALFDLSYDD------- 430
            .:.|      |......||     ::.||:..:..:|..|....||||:.::.|..||
 Worm  1784 TKTP------YIMNNGAKK-----FLGFENERSLKEKMKYATDRNLGGLMIWALDLDDDADTLLN 1837

  Fly   431 ---FRGLCTNEK 439
               ..|||:..|
 Worm  1838 LVSSAGLCSGGK 1849

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Idgf6	NP_001286499.1	GH18_IDGF	30..450	CDD:119352	97/448 (22%)
		Glyco_18	31..429	CDD:214753	91/425 (21%)
lmd-4	NP_504862.2	LysM	25..65	CDD:197609
		LysM	79..120	CDD:197609
		LysM	142..185	CDD:197609
		LysM	209..250	CDD:197609
		LysM	270..313	CDD:197609
		LysM	334..377	CDD:197609
		LysM	401..444	CDD:197609
		LysM	469..509	CDD:197609
		LysM	550..590	CDD:197609
		LysM	635..678	CDD:197609
		LysM	710..750	CDD:197609
		LysM	760..802	CDD:197609
		LysM	876..919	CDD:197609
		Self-incomp_S1	1359..1433	CDD:283566
		Glyco_18	1480..1825	CDD:214753	90/422 (21%)
		GH18_chitinase-like	1481..1824	CDD:299167	90/420 (21%)
		ChtBD1_GH18_2	1873..1924	CDD:211315
		ChtBD1_GH18_2	1951..2002	CDD:211315

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160164406
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG3325
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.700