DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and cht-2

DIOPT Version :10

Sequence 1:NP_477081.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:403 Identity:89/403 - (22%)
Similarity:164/403 - (40%) Gaps:101/403 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YLVYGYAGIERDSHKAVSLNQQLDLDLGKGLYRTVTRLKRKYPNVKILLSVGGDKDIELDKDAKE 126
            :||:.:..::.|.      :.:|:.|..|.....|..:..::|::|:|.:|||.::         
 Worm    56 HLVFAFFVVDSDG------SVKLEGDAAKARLEHVKEVASRHPDLKLLYAVGGWEN--------- 105

  Fly   127 LPNKYLELLESP-TGRTRFVNTVYSLVKTYGFDGLDVAWQFPKNKPKKVHSGIGSLWKGFKKVFS 190
              ::|..:|.:. :.|:..::....::|.|||||:|:.|::|                     .:
 Worm   106 --SQYFSVLTADHSRRSILISNFVKVIKEYGFDGVDIDWEYP---------------------VT 147

  Fly   191 GDSIVDEKSEEHKEQFTALLRDVKNAFRP------DNLLLS-------TTVLPNVNSSLFYDIPA 242
            |.::  |.:...:..:..|:|:::|..|.      .:.|:|       ..:.|.      ||:..
 Worm   148 GGAV--EGTPADRRNYVNLMRELRNELRDLESETGKSYLISFAGAAGHWVLKPG------YDLQQ 204

  Fly   243 VVNYLDFVNLGTFDFFTPQRNPEVADYAAPIYELSERNPE-----FNVAAQVKYWLRNNCPASKI 302
            ::.|.||||:.::|:|....:...| |..|...|....|:     .||.|.:|.:........||
 Worm   205 LMKYCDFVNVMSYDYFGAWASKWGA-YTGPPAPLQFAMPKKFSGRMNVHATMKDYSCQIKATDKI 268

  Fly   303 NVGVATYGRPWK-------LTDDSGDTGVPPVKD-VKDEAPVGGNTQVPGIYSWPEVCALLPNQN 359
            |:||..|||.||       .|||...|......: .|.|   ||:.|      |.::........
 Worm   269 NMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGTKFE---GGDVQ------WRDLHEKFDTTK 324

  Fly   360 NAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPDTAADKAGYVRTENLGGVALF 424
            ..:..|:..|.|.:.: .|.|                 |.:|:.::...|..|:...|:|||.::
 Worm   325 TKFHSGSKTPFIWLSE-QKTF-----------------VGYENAESLKHKVDYIVENNIGGVMIW 371

  Fly   425 DLSYDDFRGLCTN 437
            .:.:||.:|...|
 Worm   372 AIDFDDDQGTLLN 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_477081.1 GH18_IDGF 30..450 CDD:119352 89/403 (22%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 85/393 (22%)
ChtBD1_GH18_2 418..469 CDD:211315
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.