DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf6 and Ovgp1

DIOPT Version :9

Sequence 1:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_031722.1 Gene:Ovgp1 / 12659 MGIID:106661 Length:721 Species:Mus musculus


Alignment Length:433 Identity:105/433 - (24%)
Similarity:188/433 - (43%) Gaps:95/433 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LVCYYDSASFVKEGLGKLVIDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQLDLDLGKGLYRT 95
            ||||:.:.:..:.|...::..:|:|.|  |.:|::.:|.:..:...|.:|..:      ..||..
Mouse    24 LVCYFTNWAHSRPGPASIMPHDLDPFL--CTHLIFAFASMSNNQIVAKNLQDE------NVLYPE 80

  Fly    96 VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTYGFDGL 160
            ..:||.:...:|.|||:||         .....:::..:|.:...|.:|:::|.|.::.:|||||
Mouse    81 FNKLKERNRELKTLLSIGG---------WNFGTSRFTAMLSTLANREKFIDSVISFLRIHGFDGL 136

  Fly   161 DVAWQFPKNKPKKVHSGIGSLWKGFKKVFSGDSIVDEKSEEHKEQFTALLRDVKNAFRPD----- 220
            |:.:.:|..:....|    ..|                      .|..|:.:::.||..:     
Mouse   137 DLFFLYPGLRGSPPH----DRW----------------------NFLFLIEELQFAFEREALLTQ 175

  Fly   221 --NLLLSTTV--LPN-VNSSLFYDIPAVVNYLDFVNL------GTFDFFTPQRNPEVADYAAPIY 274
              .||||..|  :|: :::|  ||...:...|||:|:      |:::.||        .:.:|::
Mouse   176 HPRLLLSAAVSGIPSIIHTS--YDALLLGRRLDFINVLSYDLHGSWEKFT--------GHNSPLF 230

  Fly   275 ELSERNPEFNVAAQVKYWLRNNCPASKINVGVATYGRPWKLTDDSGDTGVPPVKDVKDEAPVGGN 339
            .|.|.:.  :.|..:.||.:...||.|:.:|..||||.:.|..:| ..|:....  ...|..|..
Mouse   231 SLPEDSK--SSAYAMNYWRKLGTPADKLIMGFPTYGRNFYLLKES-KNGLQTAS--MGPASPGKY 290

  Fly   340 TQVPGIYSWPEVCALLPNQNNAYLKGANAPLIKVQDPAKRFGSYAYRAADKKGDNGIWVSFEDPD 404
            |:..|..::.|||:.                  ||...|.:..|.|.....||..  |:.::|..
Mouse   291 TKQAGFLAYYEVCSF------------------VQRAKKHWIDYQYVPYAFKGKE--WLGYDDTI 335

  Fly   405 TAADKAGYVRTENLGGVALFDLSYDDFRG-LCTNEKYPILRAI 446
            :.:.||.||:.|:.||..::.|..||.|| .|.|..:|::..:
Mouse   336 SFSYKAMYVKREHFGGAMVWTLDMDDVRGTFCGNGPFPLVHIL 378

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 105/433 (24%)
Glyco_18 31..429 CDD:214753 98/413 (24%)
Ovgp1NP_031722.1 Glyco_18 23..360 CDD:214753 98/413 (24%)
GH18_chitolectin_chitotriosidase 24..382 CDD:119351 105/433 (24%)