DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4927 and Gzma

DIOPT Version :10

Sequence 1:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:267 Identity:74/267 - (27%)
Similarity:111/267 - (41%) Gaps:46/267 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 IVGGAKAAGREFPFMALLGQRGKNSSQIDWDCGAIIIHPKFVLTAAHCLETSETKEQRLDPNYDG 169
            |:||........|:|.||      ..:.|..|...:|...:|||||||:              .|
  Rat    29 IIGGDTVVPHSRPYMVLL------KLKPDSVCAGALIAKNWVLTAAHCI--------------PG 73

  Fly   170 PKYVVRLGELDYNSTTDDAQPQDFRVLNYVVHPAYGEDDDTGSRKNDIAVVELEMEATFSEYVAP 234
            .|..|.||.   :|...:.:.|...|.....:|.:    |..:.:.|:.::.|:.:||.::.||.
  Rat    74 KKSEVILGA---HSIKKEPEQQILSVKKAYPYPCF----DKHTHEGDLQLLRLKKKATLNKNVAI 131

  Fly   235 ACLPLDGGNEQ--LQVAAAGWGATSESGHASSHLLKVSLDRYDVAECSQRLEHKIDV---RTQLC 294
            ..||..|.:.:  .:...||||........|..|.:|::...|...|:....:..:.   ...:|
  Rat   132 LHLPKKGDDVKPGTRCHVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMIC 196

  Fly   295 AGSRSTSADTCYGDSGGPVFVQHPIYSCLKQVIGITSYGL--VCGVQGLPSVYTKV---HLYTDW 354
            ||:.....|:||||||||:.       |.....|||::||  .||....|.:||.:   ||  ||
  Rat   197 AGNLRGGKDSCYGDSGGPLL-------CEGIFRGITAFGLEGTCGDPKGPGIYTLLSDKHL--DW 252

  Fly   355 IENIVWG 361
            |.....|
  Rat   253 IRKTAKG 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 73/262 (28%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 73/262 (28%)

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