DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4945 and CHK1

DIOPT Version :9

Sequence 1:NP_788382.1 Gene:CG4945 / 36850 FlyBaseID:FBgn0034137 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_009833.1 Gene:CHK1 / 852577 SGDID:S000000478 Length:527 Species:Saccharomyces cerevisiae


Alignment Length:416 Identity:99/416 - (23%)
Similarity:165/416 - (39%) Gaps:100/416 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DII--QIVGEGWFGKILLVEHRGSQTEM---VLKAV--------PKPYVTLRDFYREFHYGLHLG 78
            |::  ..||:|.|..:     :.:..:|   ::.||        .|..::.:|..:|........
Yeast    14 DVVLGDTVGQGAFACV-----KNAHLQMDPSIILAVKFIHVPTCKKMGLSDKDITKEVVLQSKCS 73

  Fly    79 VHRHIVTTYDVAFETAGFYVFTQEYAPLGDLTSNV-----TDSGVGEVYSKRVAKQLASAIDYMH 138
            .|.:::...|........::.. |.|..|||...:     .||.|.:.|    .:||.|||:|:|
Yeast    74 KHPNVLRLIDCNVSKEYMWIIL-EMADGGDLFDKIEPDVGVDSDVAQFY----FQQLVSAINYLH 133

  Fly   139 SK-DIVHRDIKLDNVLIYRSDFQRIKLCDFGESFPTGSTVERRNEWL----------PYSPPEVL 192
            .: .:.|||||.:|:|:.::.  .:||.|||    ..|...|::..|          ||..||||
Yeast   134 VECGVAHRDIKPENILLDKNG--NLKLADFG----LASQFRRKDGTLRVSMDQRGSPPYMAPEVL 192

  Fly   193 EIKPEGSYKADPSHDVWQFGIVIFVCLTGCLPWQKAASDDPRYVRYLAWQGGLMMMP-------- 249
              ..|..|.||.: |:|..||::||.|||..||:..:.::..:|.::...|.|...|        
Yeast   193 --YSEEGYYADRT-DIWSIGILLFVLLTGQTPWELPSLENEDFVFFIENDGNLNWGPWSKIEFTH 254

  Fly   250 ---LRR--TPRLFKLLTSNAQRMFKRFFARIS--------NRPKSLA--------------DVTK 287
               ||:  .|...|.:|..|.::......|.|        |.|:.||              :..|
Yeast   255 LNLLRKILQPDPNKRVTLKALKLHPWVLRRASFSGDDGLCNDPELLAKKLFSHLKVSLSNENYLK 319

  Fly   288 FLDD-----RWLA-KTAQKEMAEYETDELCPSMYSFHSSPDEKNKLLYTLADCGIE----TNVDR 342
            |..|     |::: :....|:||.|.|       |.|.......:..:|..|....    |.:.:
Yeast   320 FTQDTNSNNRYISTQPIGNELAELEHD-------SMHFQTVSNTQRAFTSYDSNTNYNSGTGMTQ 377

  Fly   343 QQKKNRIKDWIESSIITEEDEEENEE 368
            :.|..:...:..:::....||.:..|
Yeast   378 EAKWTQFISYDIAALQFHSDENDCNE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4945NP_788382.1 SPS1 25..358 CDD:223589 96/404 (24%)
STKc_SBK1 32..293 CDD:270889 83/327 (25%)
CHK1NP_009833.1 PKc_like 13..281 CDD:419665 75/285 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.