DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and kcnh6b

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_073774351.1 Gene:kcnh6b / 570070 ZFINID:ZDB-GENE-121214-55 Length:918 Species:Danio rerio


Alignment Length:550 Identity:135/550 - (24%)
Similarity:247/550 - (44%) Gaps:85/550 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 KRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTN--TDKIGKGCPAMEDAALSSEIRGS 266
            :||.||.....::.:..::.:|.:            |.|.  |..:..|...:.:..|.:.    
Zfish    39 RRSNPSTAHSNIELVTPKVKERTQ------------NVTEKVTQVLSLGADVLPEYKLQAP---- 87

  Fly   267 SVLCNRLSVDPTLQSHYR-----WLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLC-- 324
                   .|...:..||.     |..::.|.|||..:|....|.|. :|:.......|..|.|  
Zfish    88 -------DVHKWIMLHYSPFKAIWDWVILLLVLYTAVFTPFSAAFL-LNELEDERRQTCGYTCNP 144

  Fly   325 --------DFIYLLDTLVHMHEGFLDQG-LLVRDAFRLRRHYFHTKGW-YLDVLSMLPTD-LAYI 378
                    |.:::.|.::.....:::.. .:|....|:..||.  ||| ::|:::.:|.| |.:.
Zfish   145 LNVVDVIVDVLFIADIVITFRTTYVNHNDEVVTHPKRIAIHYI--KGWFFIDMVAAIPFDLLIFR 207

  Fly   379 WWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAIL-----VLIH 438
            ....||.::|.    .:::..||||:.|:....||   .:.|..|      ||.:|     ::.|
Zfish   208 SGSDETTATLI----GLLKTARLLRLVRVARKLDR---YSEYGAA------VLFLLMCTFGLIAH 259

  Fly   439 WNACMYFAISY-EIGFSSDSWVYNLN---GTRNN--------TLQRQYIYSFYWSTLTLTTIG-E 490
            |.||:::||.: |..:....|:.||.   |.|.|        ::|.:||.:.|::..:||::| .
Zfish   260 WLACIWYAIGHVERPYMKTGWLDNLADQLGKRYNDSDASSGPSIQDKYITALYFTFSSLTSVGFG 324

  Fly   491 TPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHEL 555
            ..:|..:.|.:|.:.....|.|::|:|.||:.::|..:......:..:|..||:::.|.::...|
Zfish   325 NVSPNTNSEKMFSICVMFIGSLMYASIFGNVSAIIQRLYSGTTRYHTQMLRVKEFIRFHQIPGGL 389

  Fly   556 EARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKL 620
            ..|:..:|.:.||.:..:|...||...|:.|:|:|.:.::...|:..::|.......|.||.::.
Zfish   390 RQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQNCKVFRGASKACLRALAVRF 454

  Fly   621 KLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGE-VSVLEIAGNRTGN 684
            :.....|||.:..:||:.:.::.:.||.:.|...:  .|||.||...|||| |::....|:    
Zfish   455 RSTHSPPGDALYHQGDMLRALHFISRGSIQVSQHN--IVLAILGKNDVFGEPVNLYAEPGH---- 513

  Fly   685 RRTANVRSLGYSDLFCLAKRDLWETLSDYP 714
             ..|:|.:|.|.||..:.:.||.|.|..||
Zfish   514 -SNADVTALTYCDLHRIRRDDLLEVLDMYP 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 72/282 (26%)
CAP_ED 604..717 CDD:237999 34/111 (31%)
CLZ 720..790 CDD:465160
kcnh6bXP_073774351.1 None
Blue background indicates that the domain is not in the aligned region.

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