DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and kcnh4b

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_073774395.1 Gene:kcnh4b / 567442 ZFINID:ZDB-GENE-121214-54 Length:1193 Species:Danio rerio


Alignment Length:720 Identity:178/720 - (24%)
Similarity:313/720 - (43%) Gaps:137/720 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 DTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFS 239
            :|.:|.|:.....|.:   |.|     .:::|..|..||...|:..:||            .:|:
Zfish   135 ETHEKSHHSSKTDDKA---NSR-----TTEKSHISKARRRGHAMIYQLT------------SQFT 179

  Fly   240 NTTNTD-KIGKGC---PAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAI-----VSLAVLY 295
            ..:..| |:.:..   |::.:..::: ::.|..:....||...|   :.|:.:     |::.|.|
Zfish   180 RDSKNDVKLSRDMFEKPSLPEYKVAA-VQKSRFILLHYSVSKAL---WDWMILLATFYVAVTVPY 240

  Fly   296 NIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQ-GLLVRDAFRLRRHYFH 359
            |:.|.....|     ::|.......|...:.:::||.:::....::.| |.:|.:...:..||..
Zfish   241 NVCFTAYSDV-----ETAGRSTIVSDIAVEMLFILDIILNFRTTYVSQSGQVVYEPRSICLHYAT 300

  Fly   360 TKGW-YLDVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNA 423
            |  | ::|:::.||.||.|.:  ..|.:||.    .:::..||||:.||.:..||..        
Zfish   301 T--WFFVDLVAALPFDLLYAF--NITVTSLV----HLLKTVRLLRLLRLLQKLDRYS-------- 349

  Fly   424 FRICKVVLAIL-----VLIHWNACMYFAI-----------SYEIGFSSDSWVYNLNGTR------ 466
             :...:||.:|     :|.||.||:::.|           :::||     |::.| |.|      
Zfish   350 -QYSAMVLTLLMSMFALLAHWMACIWYIIGRKEMETNASGAWDIG-----WLHEL-GKRLDKPYM 407

  Fly   467 NNT-----LQRQYIYSFYWSTLTLTTIGETPTPEN-DVEYLFVVADFLAGVLIFATIVGNIGSMI 525
            |:|     ::..||.|.|::..:||::|......| |.|.:|.|...|.|.|:.|.:.||:.::|
Zfish   408 NSTFGGPSVRSAYIASLYFTLSSLTSVGFGNVCANTDAEKIFSVCTMLIGALMHAVVFGNVTAII 472

  Fly   526 SNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEI 590
            ..|...|..:..||..:|.::...|:..:|:.|::.:|..|||.:..:|...:|...||:|:|:|
Zfish   473 QRMYSRRSLYHTRMKDLKDFIRVHRLPQQLKQRMLEYFQTTWSVNNGIDVNELLHDFPDELRADI 537

  Fly   591 AIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDD 655
            |:.::.|.| |:.:|.....|.|.:|.|.:|....:||:|:.|:||..:..|.|..|.|.|:.|:
Zfish   538 AMHLNKDIL-QLPVFEAASRGCLRSLSLHIKTSFCTPGEYLIRQGDALQANYFVCSGSLEVLKDN 601

  Fly   656 GITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTL 720
              .|||.||.|.:.|.    ::.|.....:..|:|::|.|.||..:..:.|.:.|..|||..:..
Zfish   602 --MVLAILGRGDLIGS----DLPGQNHVIKTNADVKALTYCDLQYIGVKGLSDVLELYPEYANIF 660

  Fly   721 T---QRGCQLLRKDGLLDEQIFADSQRVHDSIEGGIEKLELSVENLNMRLARLLAE----YTASQ 778
            |   .|......::|...||.:.|              ..:|.||....:.....:    :..|.
Zfish   661 TIDIHRNLTYNLREGSETEQNYPD--------------FSVSTENKRPSVVEKADDPDKYFHVSS 711

  Fly   779 AKIKQRLAKLEMNGGP----------GTWRLECEPQSRARSG-RLYSLQPKRRPRSR-------P 825
            |....|...|...|.|          |...::.......||. |.:|..|..:|.|:       |
Zfish   712 ASSTCRNLLLPNLGSPVRRTSLGNLLGEELMQFNALRHCRSPVRGWSPNPSPKPPSKVQKQTQQP 776

  Fly   826 DATAK 830
            .:|.|
Zfish   777 SSTPK 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 71/281 (25%)
CAP_ED 604..717 CDD:237999 37/112 (33%)
CLZ 720..790 CDD:465160 13/76 (17%)
kcnh4bXP_073774395.1 None

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