DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and Hcn4

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001074661.1 Gene:Hcn4 / 330953 MGIID:1298209 Length:1201 Species:Mus musculus


Alignment Length:638 Identity:158/638 - (24%)
Similarity:281/638 - (44%) Gaps:103/638 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GGGAE----QDEDEE------EDDDDVDEDDDDEFGASVCEDNPEEAIARADHDTQQKQHY---- 182
            |||:.    .|..||      |.|....||.... |.:...:.|..|...|.....|:...    
Mouse   114 GGGSSLGHLHDSAEERRLIAAEGDASPGEDRTPP-GLATEPERPATAAQPAASPPPQQPPQPASA 177

  Fly   183 ---QPNASDSSYVENGR----KLIQEPSKRSKPSA-LRRTLQALRQRLTKRNRPKPPDWFLEKFS 239
               ||:|..:..||.|.    :::.|...|...|. ::|...|:.|       |....:.|..|.
Mouse   178 SCEQPSADTAIKVEGGAAASDQILPEAEVRLGQSGFMQRQFGAMLQ-------PGVNKFSLRMFG 235

  Fly   240 NTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRA 304
            :....::        |...:.|  .|..:      :.|.....:.|...:.|.::.|:|.:....
Mouse   236 SQKAVER--------EQERVKS--AGFWI------IHPYSDFRFYWDLTMLLLMVGNLIIIPVGI 284

  Fly   305 VFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFL--DQGLLVRDAFRLRRHYFHTKGWY-LD 366
            .|::...:.|  |...:.:.|..:|:|.:::...|.:  |...::.|..|::..|.  |.|: :|
Mouse   285 TFFKDENTTP--WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYL--KSWFVVD 345

  Fly   367 VLSMLPTDLAYIWWPPETCSSLYLPCPV--------IVRLNRLLRINRL------WE-----WFD 412
            .:|.:|.|..::.......|.:|.....        |:.|.||||::||      ||     .:|
Mouse   346 FISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD 410

  Fly   413 RTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYS 477
            ......      ||..::..:|:|.||:.|:.|.:.....|..|.|| ::||..||:..:||.|:
Mouse   411 LASAVV------RIVNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWV-SINGMVNNSWGKQYSYA 468

  Fly   478 FYWSTLTLTTIG---ETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRM 539
            .:.:...:..||   :.|...:||  ...:...:.|...:|..:|:..::|.:::.:|.::|.:.
Mouse   469 LFKAMSHMLCIGYGRQAPVGMSDV--WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKY 531

  Fly   540 DGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVR- 603
            ..|:|||:|.::..:...|:..::.:.: |....|||.:|..|.:.|:.||   ::.:..|.|. 
Mouse   532 KQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILGELSEPLREEI---INFNCRKLVAS 592

  Fly   604 --IFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVV--GDDGITVLATLG 664
              :|.:.:|..:.:::.||:.:||.|||||.|:|.:||:||.::.|.:||:  |:..    ..|.
Mouse   593 MPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE----TKLA 653

  Fly   665 AGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEAR 717
            .||.|||:.:|      |..||||:||:..|..|:.|:..:..|.|.:||..|
Mouse   654 DGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMR 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 62/271 (23%)
CAP_ED 604..717 CDD:237999 42/114 (37%)
CLZ 720..790 CDD:465160
Hcn4NP_001074661.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..183 16/69 (23%)
Involved in subunit assembly. /evidence=ECO:0000250 209..260 11/73 (15%)
Ion_trans_N 218..260 CDD:400630 9/64 (14%)
PLN03192 253..>740 CDD:215625 125/481 (26%)
CAP_ED 595..703 CDD:237999 43/116 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..902
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..1201
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.