DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and che-6

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001343628.1 Gene:che-6 / 182823 WormBaseID:WBGene00000487 Length:655 Species:Caenorhabditis elegans


Alignment Length:584 Identity:176/584 - (30%)
Similarity:294/584 - (50%) Gaps:97/584 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 HYRWLAIVSLAVLYN----IIFV---VGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEG 339
            :|.|...||..|:||    :||:   :....||.        |..|:.:.|.::::|..|.....
 Worm    68 YYIWSFFVSFGVMYNMFAMVIFIFADIKTQYFWN--------WIFLNVMFDMVFIVDIFVQSRLT 124

  Fly   340 FLDQGLLVRDAFRLRRHYFHTKGWYL----DVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNR 400
            :|.:|..|::..:||::||..|   |    |:..:||.|  ::.:..::.|        :||..|
 Worm   125 YLHEGEEVKNTKKLRKNYFFQK---LKVANDIFCLLPLD--FLLFFDDSMS--------LVRTIR 176

  Fly   401 LLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISY----------EIGFS- 454
            ::::.||.::..||:..|.:|.||:|..:.::.:||.|||||:||..|.          |.||| 
 Worm   177 IVKVIRLMDFVQRTQQQTTFPRAFKIILLAVSCIVLFHWNACLYFLFSLYEGITEESQTEFGFSY 241

  Fly   455 ----------------SDSW-------VYNLNGTRNN-------------------TLQRQYIYS 477
                            .:.|       ..:|:..|::                   ...|:|..|
 Worm   242 YKVFEPVFPTCQAYYDENCWFGEDIDHTLDLDDVRDSYKKEMAEYWKDKHYRWTTGNFSREYSMS 306

  Fly   478 FYWSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGV 542
            .|||.||:||.|:.|.|....:....|.|.|.|||:||||:|::||:::.|:....||:..|||:
 Worm   307 IYWSALTITTCGQQPWPSTSSQNSLEVFDTLIGVLVFATIIGSVGSVVTQMSQTVNEFRQMMDGI 371

  Fly   543 KQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHD 607
            |.||.:|.|...::.|.:..|.|..:.:...|||.:|:.||.:|:|.||..:||:||:.::||..
 Worm   372 KFYMKYREVNSAIQERALSCFMYLMAHNQLDDEEGILSLLPPRLQANIAANLHMETLQNIQIFAL 436

  Fly   608 TEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEV 672
            .|...:..:||.:|.|||||.||:|||.:..||::|||:|||.|:.||....:..|..|:.|||:
 Worm   437 CESRFMHEVVLLVKQQVFSPNDYLCRKNEKAKELFIVKKGKLRVIDDDTGEEMGELTEGATFGEL 501

  Fly   673 SVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDGLLDEQ 737
            |::.:.||..|.||..:::|:|:||::.|.:.|:...|.::|:...|:......||...|||:..
 Worm   502 SIVYVKGNLLGTRRCCSLQSVGFSDIYVLYRDDVSRLLQEFPQEYKTIVMNARNLLHSRGLLETT 566

  Fly   738 IF------ADSQRVHD------SIEGGIEKLELSVENLNMRLARLLAEYTASQAKIKQRLAKLE 789
            ..      :|.:...|      |:...:.:|...::.||..:..::..::.|.:..||::..||
 Worm   567 ELGEMCDPSDHEEADDLVLEEMSVVEQLNRLNGIIDGLNGNMNVMILSFSNSCSYYKQKITGLE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 85/310 (27%)
CAP_ED 604..717 CDD:237999 46/112 (41%)
CLZ 720..790 CDD:465160 16/82 (20%)
che-6NP_001343628.1 Ion_trans 68..>245 CDD:459842 56/197 (28%)
PLN03192 <303..>581 CDD:215625 106/277 (38%)
CAP_ED 433..544 CDD:237999 45/110 (41%)

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