DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and Kcnh5

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_598294.1 Gene:Kcnh5 / 171146 RGDID:621417 Length:988 Species:Rattus norvegicus


Alignment Length:590 Identity:160/590 - (27%)
Similarity:256/590 - (43%) Gaps:112/590 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 IQEPSKR--SKPSALRRTL---QALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAA 258
            |::.|.:  :|.:.|.|.|   :::.|:||..|:                |:.:.|.....|...
  Rat   138 IEDDSTKGWTKFARLTRALTNSRSVLQQLTPMNK----------------TETVHKHSRLAEVLQ 186

  Fly   259 LSSEIRGSSVLCNRLSVDPTLQSH-----------YRWLAIV-----SLAVLYNIIFVVGRAVFW 307
            |     ||.:|.......|....|           :.|:.::     ::.|.||:.|.       
  Rat   187 L-----GSDILPQYKQEAPKTPPHIILHYCAFKTTWDWVILILTFYTAIMVPYNVSFK------- 239

  Fly   308 EINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQ-GLLVRDAFRLRRHYFHTKGWY-LDVLSM 370
              .|.....|..||.:.|.|:|:|.:::.|..|:.. |.::.|...:|.:|..|  |: :|:||.
  Rat   240 --TKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKT--WFVIDLLSC 300

  Fly   371 LPTDLAYIWW-PPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAIL 434
            ||.|:...:. ..|..|||:....|:    ||||:.|:....|         :.......||.:|
  Rat   301 LPYDIINAFENVDEGISSLFSSLKVV----RLLRLGRVARKLD---------HYLEYGAAVLVLL 352

  Fly   435 VLI-----HWNACMYFAI-SYEI------GFSSDSWVYNLN---GT--RNNT----------LQR 472
            |.:     ||.||::::| .||:      ....|||:|.|.   ||  |.||          ...
  Rat   353 VCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTSAGIWEGGPSKDS 417

  Fly   473 QYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQ 536
            .|:.|.|::..:||||| ....|..|||.:|.||..:.|.|::|||.||:.::...|......:.
  Rat   418 LYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYH 482

  Fly   537 NRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQ 601
            ..::.|:.::...:|...|..||:.:...|||.|..:|.|:||:..|..::|:|.:.::.....:
  Rat   483 EMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNE 547

  Fly   602 VRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAG 666
            ...|.....|.|.||.::.:....:|||.|...|:....:..|..|.|.|:.|:  .|:|.||.|
  Rat   548 HPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVIQDE--EVVAILGKG 610

  Fly   667 SVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPE-ARS-----TLTQRGC 725
            .|||::...|    .|.....||||:|.|.||..:.:..|.:.|..|.. |.|     |||   |
  Rat   611 DVFGDIFWKE----TTLAHACANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLTLT---C 668

  Fly   726 QLLRK 730
            .|.::
  Rat   669 NLRKR 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 82/293 (28%)
CAP_ED 604..717 CDD:237999 36/113 (32%)
CLZ 720..790 CDD:465160 4/11 (36%)
Kcnh5NP_598294.1 PAS_9 39..132 CDD:463873
PLN03192 217..>616 CDD:215625 121/424 (29%)
Selectivity filter. /evidence=ECO:0000250 432..437 3/4 (75%)
Crp 551..758 CDD:440428 43/132 (33%)
Calmodulin-binding. /evidence=ECO:0000255 704..715
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 718..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 839..897
CAD (involved in subunit assembly). /evidence=ECO:0000250 909..948
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 946..965
Blue background indicates that the domain is not in the aligned region.

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