DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and hcn1

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_068072094.1 Gene:hcn1 / 100334297 ZFINID:ZDB-GENE-110520-1 Length:925 Species:Danio rerio


Alignment Length:472 Identity:129/472 - (27%)
Similarity:228/472 - (48%) Gaps:55/472 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 VDPTLQSHYRWLAIVSLAVLYNIIFV-VGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHE 338
            :.|.....:.|..|:.:.::.|:|.: ||...|.|...::   |...:...|.|:|:|.:::...
Zfish   112 IHPYSDFRFYWDLIMLIMMMGNLIIIPVGITFFSEQTTTS---WLVFNVASDTIFLVDLVMNFRT 173

  Fly   339 GFLDQ--GLLVRDAFRLRRHYFHTKGWY-LDVLSMLPTDLAYIWWPPETCSSLYLPCPV------ 394
            |.:::  ..::.|...::.:|.  |.|: :|.||.:|.|..::.......|.:|.....      
Zfish   174 GIVNEESSEIILDPKVIKMNYL--KSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRF 236

  Fly   395 --IVRLNRLLRINRL------WE-----WFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFA 446
              |:.|.||||::||      ||     .:|......      ||..::..:|:|.||:.|:.|.
Zfish   237 TKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV------RIFNLIGMMLLLCHWDGCLQFL 295

  Fly   447 ISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIG---ETPTPENDVEYLFVVADFL 508
            :.....|..|.|| :|||..|::..:||.|:.:.:...:..||   ..|...:|:  ...:...:
Zfish   296 VPLLQDFPPDCWV-SLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDL--WITMLSMI 357

  Fly   509 AGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGAL 573
            .|...:|..||:..::|.:::.:|.::|.:...|:|||:|.::..::..::..::.:.: |....
Zfish   358 VGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIF 421

  Fly   574 DEERVLAALPDKLKAEIAIQVHMDTLKQVR---IFHDTEPGLLEALVLKLKLQVFSPGDYICRKG 635
            ||:.:|..|.|.||.||   |:.:..|.|.   :|.:.:|..:..::.|||.:||.|.|||.|:|
Zfish   422 DEDSILNELNDPLKEEI---VNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYIIREG 483

  Fly   636 DVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFC 700
            .|||:||.::.|..||:......:..|  .||.|||:.:|      |..||||:||:..|..||.
Zfish   484 TVGKKMYFIQHGVASVITKFNKELKLT--DGSYFGEICLL------TKGRRTASVRADTYCRLFS 540

  Fly   701 LAKRDLWETLSDYPEAR 717
            |:.....|.|.:||..|
Zfish   541 LSVDHFNEVLEEYPMMR 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 64/272 (24%)
CAP_ED 604..717 CDD:237999 43/112 (38%)
CLZ 720..790 CDD:465160
hcn1XP_068072094.1 Ion_trans_N 75..117 CDD:400630 1/4 (25%)
PLN03192 110..>614 CDD:215625 129/472 (27%)
CAP_ED 452..560 CDD:237999 44/114 (39%)
PHA03247 <653..906 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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