DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15708 and CG12684

DIOPT Version :10

Sequence 1:NP_611104.3 Gene:CG15708 / 36805 FlyBaseID:FBgn0034099 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_572173.1 Gene:CG12684 / 31390 FlyBaseID:FBgn0029717 Length:231 Species:Drosophila melanogaster


Alignment Length:241 Identity:79/241 - (32%)
Similarity:134/241 - (55%) Gaps:24/241 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQTNPKPSDTQSLRCLHCMKVIRCSRYDTSELVRHIQQDHPEIYAVTTDKIKNLHKLAADHGIS 65
            ||:.|.:..  |.:|||||.|||:|||:|:..|:|||:.:|||::.:...|::|::..:.|....
  Fly     1 MSKQNVQKD--QCVRCLHCKKVIQCSRFDSGGLLRHIEYEHPELFTMARSKLRNVYNPSTDQSYW 63

  Fly    66 EERLSKISKMTGLSESQMAEKAEKYMAKKKNYGRSGGSVAGDPAAVSE----AASYK---TEKPS 123
            ...:.| ..|:.:|:|::   ..:.:.:.||..|:........::.::    ||:|.   ::..:
  Fly    64 ACEVRK-RMMSNVSDSEL---NSQNLGRCKNKKRTSSDSISKKSSTAKCNVAAANYSCPHSKAKN 124

  Fly   124 SPCPCSRPLENSTSH----RRKCYRASIERWAPAEGRIFCPCCATSRRPLIKAATEISNNGCCAA 184
            |.||.:|.....:.|    |:..|::|..||...:|.||||.|...:||::|.|:..::..|   
  Fly   125 STCPKARTNGPCSPHHMIFRKMAYKSSARRWCAMDGSIFCPACGYKKRPVVKCASGWNSRWC--- 186

  Fly   185 WVVSCWPLCFLPCLMSADNNEYLYCANCRAFLGIYNREKSCVQPSK 230
                .|..||:|||.|:||.|.:||.:|..|||.:||||..::|:|
  Fly   187 ----SWAFCFMPCLKSSDNGENIYCGHCNTFLGAFNREKQSLKPNK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15708NP_611104.3 LITAF 155..221 CDD:197841 27/65 (42%)
CG12684NP_572173.1 LITAF 159..219 CDD:197841 27/66 (41%)

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