DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: Tsf3 and SRPRB

Sequence 1:NP_523759.1 Gene:Tsf3 FlyBaseID:FBgn0034094 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_067026.3 Gene:SRPRB HGNCID:24085 Length:271 Species:Homo sapiens

Alignment Length:155 Identity:31/156 (20%)
Similarity:51/156 (33%) Gaps:54/156 (35%)


  Fly   293 WPVVAARRSHAAQV--------------QRLVTGLNHDEPDSWQNALLSLLETYHVFTVPLDNVI 343
            |.::.:|||....|              .||:|||..|.    |.::......|.|.....:::.
Human    54 WKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDT----QTSITDSCAVYRVNNNRGNSLT 114

  Fly   344 AID---------DYLDQATAFQSAYSFPECNPPRSIVFCTTSIIQHIKCSWLQEASQVYGVQPNI 399
            .||         .:|::   |:|:        .|:|||...|.                ..|..:
Human   115 LIDLPGHESLRLQFLER---FKSS--------ARAIVFVVDSA----------------AFQREV 152

  Fly   400 QCVRTMDEQQCLDNTKFKETDVVLV 424
            :.|.....|..:|:...|.|...|:
Human   153 KDVAEFLYQVLIDSMGLKNTPSFLI 177

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Tsf3NP_523759.1 PBP2_transferrin 33..368 CDD:270247 19/98 (19%)
PBP2_transferrin 369..681 CDD:270247 11/57 (19%)
TR_FER 370..656 CDD:214514 11/56 (20%)
SRPRBNP_067026.3 SRPRB 62..241 CDD:312813 28/148 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11485
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.