DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf3 and Tsf1

DIOPT Version :10

Sequence 1:NP_523759.1 Gene:Tsf3 / 36800 FlyBaseID:FBgn0034094 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_523401.2 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster


Alignment Length:714 Identity:176/714 - (24%)
Similarity:300/714 - (42%) Gaps:128/714 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WLTLILVGLFASFLSISMCVAVQPPDDGKLRVCVVESRGVYRKTPKFCPLL-----EAKSNIECV 62
            ||.|.:..|.. .|.....:|.:|    ..|:||.:   :|...   |..|     ||...:|||
  Fly    10 WLPLAVAALLL-ILGPQSSLAEEP----IYRLCVPQ---IYLAE---CQQLLADPSEAGIRMECV 63

  Fly    63 IGVDRLDCVRRIHKGTAHFGVLTSEDL-VAARWASVEILVASELRSH---ESHFEYEIVAVVDNH 123
            .|.||:||:..|.:..|.......||: :|....:.:..|.||:|:.   ::.|.||.:.:|...
  Fly    64 AGRDRVDCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKDAAFRYEGIILVKKD 128

  Fly   124 ANIHTVHDLRGARLCHPGYGLGNHWTEVLANYFEAAMVSKTCDPEMTVTEDRIASTAKYFGPSCK 188
            :.|.|:..||||:.||.|:|....:...:.......::..:.||:::.||..:.|.:::|..||.
  Fly   129 SPIRTLQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATERELKSLSEFFTQSCL 193

  Fly   189 AGPWVPDPKQDRILKNRYPSLCEMCYEPDSCDQTDKHWGRRGALYCLTSGGGNVAWARLDDVRSH 253
            .|.:...|:.||:||.:|.:||.:|.:|:.|:..||..|..||:.||..|.|.||::::..::.:
  Fly   194 VGTYSTHPETDRLLKKKYANLCALCEKPEQCNYPDKFSGYDGAIRCLDKGQGEVAFSKVQYIKKY 258

  Fly   254 FGFSGI-----PAQSNPSDFSYLCPDGHLQPLNASQPCVWVAKPW--------PVVAARRSHAAQ 305
            ||..|.     ||:.||.:|.|||.||..:|: ....|.|..:||        .|..:.:.|..|
  Fly   259 FGLPGAGPDAPPAEGNPENFEYLCEDGTRRPV-TGPACSWAQRPWSGYISNEQAVHNSEQLHQLQ 322

  Fly   306 --VQR-LVTGLNHDEPDSWQNALLSLLETYHVFTVPLDNVIAID--DYLDQATAFQSAYSFPECN 365
              ::| ...||.....|:..:.|:.....||.....:|..:.::  .|.|......||.      
  Fly   323 SRLERFFANGLQAQNKDAAAHLLIQPNAVYHSKDAAIDPKVYLERAGYKDVIERDGSAI------ 381

  Fly   366 PPRSIVFCTTSIIQHIKCSWLQEASQVYGVQPNIQCVRTMDEQQCLDNTKFKETDVVLVDQEMRV 430
              |.|..|..:..:..||..|.:|:.....:|.::||::.|   |:.....||.|:.:|......
  Fly   382 --RKIRLCAQNDDEFAKCQALHQAAYARDARPELECVQSTD---CVVALTKKEADLTIVRATGYA 441

  Fly   431 KAQRDYNLVPLLYEFAADMHDRYVTIAL--VHKDAKFESFRDLKGARACLPSFEGAAHLSVQETI 493
            .| |...|.|::||..| ..|..|.:|.  |.::|..::  .:|....|..|...||.|:.:..:
  Fly   442 DA-RSNQLQPIVYEQRA-QDDVLVAVAAPGVTREALQKA--SIKFNENCERSRAAAALLNKRRGL 502

  Fly   494 VNATGKVQSLHSYFHRDSCLWNLQSGRKCPLHYQGDEGALRCLSEGADVAFLSSDVYKKYVVGNL 558
                            |:|..:           ..|:|.::.:.        :|::.|       
  Fly   503 ----------------DACRVS-----------SSDDGEVQIVP--------ASELEK------- 525

  Fly   559 TSNWLTPGNHKDFRVLCPYGGIEKR--SNFEYCYLH-WTTRGHLMTHNSSLTRRNEIYNSLRDMD 620
                     |||.:::||  .:|:|  ::|..|.:. ...|...:..:::...:..:.:....:.
  Fly   526 ---------HKDAQLVCP--SLERRPVTDFRDCNVDVQLPRAIFIRSDTTSVEQETVKHLFSLIS 579

  Fly   621 QLFGRKYKSETRPFTLYGIFDK-RNNVLFRDDTDGLLGLQELHRDNAKRVMEHIYDRYANTQYY 683
            ..||.:.|. ...|.|:|.|.| :.||.|              .|.|.::...:.:...|.|.|
  Fly   580 DKFGARGKL-VDVFALFGEFQKGKKNVYF--------------NDKAVQLTTELKNEIQNEQIY 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf3NP_523759.1 PBP2_transferrin 33..368 CDD:270247 103/361 (29%)
PBP2_transferrin 369..681 CDD:270247 63/317 (20%)
Tsf1NP_523401.2 TR_FER 34..323 CDD:214514 90/295 (31%)
Periplasmic_Binding_Protein_Type_2 384..615 CDD:473866 62/305 (20%)

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