DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Tsf3 and Srprb

Sequence 1:NP_523759.1 Gene:Tsf3 FlyBaseID:FBgn0034094 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_001013270.1 Gene:Srprb RGDID:1304698 Length:269 Species:Rattus norvegicus

Alignment Length:155 Identity:30/156 (19%)
Similarity:49/156 (31%) Gaps:54/156 (35%)


  Fly   293 WPVVAARRSHAAQV--------------QRLVTGLNHDEPDSWQNALLSLLETYHVFTVPLDNVI 343
            |..:.:|:|....|              .||:||...|.    |.::......|.|.....:::.
  Rat    52 WKFIWSRKSSQRAVLFVGLCDSGKTLLFVRLLTGQYRDT----QTSITDSSAIYKVNNNRGNSLT 112

  Fly   344 AID---------DYLDQATAFQSAYSFPECNPPRSIVFCTTSIIQHIKCSWLQEASQVYGVQPNI 399
            .||         .:||:   |:|:        .|::||...|..                .|..:
  Rat   113 LIDLPGHESLRLQFLDR---FKSS--------ARAVVFVVDSAT----------------FQREV 150

  Fly   400 QCVRTMDEQQCLDNTKFKETDVVLV 424
            :.|.....|..:|:...|.|...||
  Rat   151 KDVAEFLYQVLIDSMALKNTPAFLV 175

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Tsf3NP_523759.1 PBP2_transferrin 33..368 CDD:270247 18/98 (18%)
PBP2_transferrin 369..681 CDD:270247 11/57 (19%)
TR_FER 370..656 CDD:214514 11/56 (20%)
SrprbNP_001013270.1 SRPRB 60..239 CDD:255367 28/148 (19%)
SR_beta 63..268 CDD:206691 27/145 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11485
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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