DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf3 and Ltf

DIOPT Version :10

Sequence 1:NP_523759.1 Gene:Tsf3 / 36800 FlyBaseID:FBgn0034094 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_032548.2 Gene:Ltf / 17002 MGIID:96837 Length:707 Species:Mus musculus


Alignment Length:751 Identity:167/751 - (22%)
Similarity:274/751 - (36%) Gaps:181/751 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LRVCVVESRGVYRKTPKFCPLLEAKSNIE---CV--------IGVDRLDCVRRIHKGTAHFGVLT 85
            |.:|:.::     .|.::|    |.||.|   |:        :|...|.||::.........::|
Mouse    14 LGLCLAKA-----TTVQWC----AVSNSEEEKCLRWQNEMRKVGGPPLSCVKKSSTRQCIQAIVT 69

  Fly    86 SE-DLVA---------------ARWASVEILVASEL-RSHESHFEYEIVAVVDNHANIHTVHDLR 133
            :. |.:.               .|..:.|:....|. |:|     |..||||.|.:|.| ::.|:
Mouse    70 NRADAMTLDGGTMFDAGKPPYKLRPVAAEVYGTKEQPRTH-----YYAVAVVKNSSNFH-LNQLQ 128

  Fly   134 GARLCHPGYGLGNHW---TEVLANYFEAAMVSKTCDPEMTVTEDRIASTAKYFGPSCKAGPWVPD 195
            |.|.||.|.|....|   ...|..|.      ....|..::.|    :.:|:|..||     ||.
Mouse   129 GLRSCHTGIGRSAGWKIPIGTLRPYL------NWNGPPASLEE----AVSKFFSKSC-----VPG 178

  Fly   196 PKQDRILKNRYPSLCEMC--YEPDSCDQT--DKHWGRRGALYCLTSGGGNVAWARLDDVRSHFGF 256
            .::|     |:|:||..|  ...:.|..:  :.:.|..|||.||....|:||:.|...|     |
Mouse   179 AQKD-----RFPNLCSSCAGTGANKCASSPEEPYSGYAGALRCLRDNAGDVAFTRGSTV-----F 233

  Fly   257 SGIPAQSNPSDFSYLCPDGHLQPLNASQPCVWVAKPWPVVAARRSHAAQV--------------Q 307
            ..:|.::....:..||||...:|:...:.|.....|...|.:|.::..:.              :
Mouse   234 EELPNKAERDQYKLLCPDNTWKPVTEYKECHLAQVPSHAVVSRSTNDKEEAIWELLRQSQEKFGK 298

  Fly   308 RLVTGLNHDEPDSWQNALLSLLETYHVFTVPLDNVIAIDDYLDQATAFQSAYSFPECNPPRS--- 369
            :..:|.......|.|..||..........||  ..:.:..||    .|....|....|..:.   
Mouse   299 KQASGFQLFASPSGQKDLLFKESAIGFVRVP--QKVDVGLYL----TFSYTTSIQNLNKKQQDVI 357

  Fly   370 -----IVFCTTSIIQHIKCSWLQEASQVYGVQPNIQCVRTMDEQQCLDNTKFKETDVVLVDQEMR 429
                 :.:|.....:..||.....||     :..:.|:.....:.|:......:.|.:.:|....
Mouse   358 ASKARVTWCAVGSEEKRKCDQWNRAS-----RGRVTCISFPTTEDCIVAIMKGDADAMSLDGGYI 417

  Fly   430 VKAQRDYNLVPLLYE-------FAADMHDR----YVTIALVHK-DAKFESFRDLKGARACLPSFE 482
            ..|.: ..|||:|.|       ...|..:|    |:.:|.|.: ||.| ::..|:|.::|     
Mouse   418 YTAGK-CGLVPVLAENQKSSKSNGLDCVNRPVEGYLAVAAVRREDAGF-TWSSLRGKKSC----- 475

  Fly   483 GAAHLSVQET---------IVNATGKVQSLHSYFHRDS-------------CLWNLQSGRKCPLH 525
               |.:|..|         :.|.|...: .:.:|.:..             |:.:.:...||..:
Mouse   476 ---HTAVDRTAGWNIPMGLLANQTRSCK-FNEFFSQSCAPGADPKSNLCALCIGDEKGENKCAPN 536

  Fly   526 ----YQGDEGALRCLSEGA-DVAFLSSDVYKKYVVGNLTSNWLTPGNHKDFRVLCPYGGIEKRSN 585
                |||..||||||:|.| :||||......:...|..|..|......|||.:||.....:..:.
Mouse   537 SKERYQGYTGALRCLAEKAGNVAFLKDSTVLQNTDGKNTEEWARNLKLKDFELLCLDDTRKPVTE 601

  Fly   586 FEYCYLHWTTRGHLMTHNSSLTRRNE----IYNSLRDMDQLFGRKYKSETRPFTLYGIFDKRNNV 646
            .:.|:|       .:..|.::..|.:    :...|.|....|||..:.....|.|:.  .|..|:
Mouse   602 AKNCHL-------AIAPNHAVVSRTDKVEVLQQVLLDQQVQFGRNGQRCPGEFCLFQ--SKTKNL 657

  Fly   647 LFRDDTDGLLGLQELHRDNAKRVMEHIYDRYANTQY 682
            ||.|:|:.|          ||...:...::|...:|
Mouse   658 LFNDNTECL----------AKIPGKTTSEKYLGKEY 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf3NP_523759.1 PBP2_transferrin 33..368 CDD:270247 86/383 (22%)
PBP2_transferrin 369..681 CDD:270247 79/362 (22%)
LtfNP_032548.2 Transferrin 24..351 CDD:395328 83/367 (23%)
PBP2_transferrin_C 361..691 CDD:270335 80/358 (22%)

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