DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf3 and depdc5

DIOPT Version :10

Sequence 1:NP_523759.1 Gene:Tsf3 / 36800 FlyBaseID:FBgn0034094 Length:714 Species:Drosophila melanogaster
Sequence 2:XP_004910648.1 Gene:depdc5 / 100498286 XenbaseID:XB-GENE-980707 Length:1608 Species:Xenopus tropicalis


Alignment Length:278 Identity:59/278 - (21%)
Similarity:90/278 - (32%) Gaps:97/278 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 WTEVLANYFEAAMVSKTCDPEMTVTE-----------------DRIASTAKYFGPSCKAGPWVPD 195
            :|.....:||.|:|    :.|:..:|                 .|.:|.::.||...:|.     
 Frog  1293 FTAFQRKWFEVALV----EEELLHSEIPPFLLPWLPSRPASYASRHSSFSRSFGGRSQAA----- 1348

  Fly   196 PKQDRILKNRYPSLCEMCYEPDSCDQTDK-HWGRRGALYCLTSGGGNVAWARLDDVRSHF----- 254
                .:|....|....:..:.|..::||: .|       |.:...||.:.....:::.|:     
 Frog  1349 ----ALLAATVPEQRTVTLDVDVNNRTDRLEW-------CSSYYHGNFSLTAAFEIKLHWMAATA 1402

  Fly   255 -----------------GFSGIPAQSNPSDF-SYLCPDG-HLQ---PLNASQPCVWVAKPWPVVA 297
                             ||..:|....|... |||..|. ..|   |||.|  |        :|.
 Frog  1403 AMLFEMVQGWHRKAPSCGFLLVPVVEGPFSLPSYLYGDPLRAQLFIPLNIS--C--------LVK 1457

  Fly   298 ARRSHAAQVQRLVTGLNHDEPDS-WQNALLSLLETYHVFTVPLDNVIAIDDYLDQATAFQSAYSF 361
            |...|      |..|.   ||:: |:...|            |..|||......|.....||::|
 Frog  1458 AENDH------LFEGF---EPETYWERMYL------------LQEVIAYRFGFIQDKYSASAFNF 1501

  Fly   362 PECNPPRSIVFCTTSIIQ 379
            |..|.|:.|....|..:|
 Frog  1502 PSENKPQYIHVTGTVFLQ 1519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf3NP_523759.1 PBP2_transferrin 33..368 CDD:270247 55/265 (21%)
PBP2_transferrin 369..681 CDD:270247 3/11 (27%)
depdc5XP_004910648.1 IML1 126..407 CDD:463510
DEP_DEPDC5-like 1184..1267 CDD:239896
DEPDC5_CTD 1285..1590 CDD:466071 59/278 (21%)
Blue background indicates that the domain is not in the aligned region.

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