DRSC/TRiP Functional Genomics Resources

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Protein Alignment clu and LOC100496989

DIOPT Version :10

Sequence 1:NP_611095.1 Gene:clu / 36793 FlyBaseID:FBgn0034087 Length:1448 Species:Drosophila melanogaster
Sequence 2:XP_002932134.3 Gene:LOC100496989 / 100496989 XenbaseID:XB-GENE-29083451 Length:1290 Species:Xenopus tropicalis


Alignment Length:1375 Identity:665/1375 - (48%)
Similarity:909/1375 - (66%) Gaps:128/1375 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 AVEDNAD---TNA--NVEKPQEGGAPDAEADGDDIDLDALQDIGITVNISSPGADLLCVQLSSME 161
            |.||||.   ||.  .|.....|...:|....||....:.|:: ..|.|..|..:|:.:|:||.|
 Frog    15 AGEDNAGQAVTNCGEGVSHASNGKLYNAVTATDDNKDTSTQEM-FDVKIQLPSGELVDIQVSSKE 78

  Fly   162 LVQEIHQLLMDREETCHRTCFSLQLDNVTLDNFAELKSINNLEQGSTIKVVEEPYTMREARIHVR 226
            |||||.|:||:.|::|||||||||.:...||||:||||:..|::||.:||||||||:||||||:|
 Frog    79 LVQEIIQVLMEHEDSCHRTCFSLQFEGNVLDNFSELKSVEGLKEGSVLKVVEEPYTIREARIHIR 143

  Fly   227 HVRDLLKNLDPADAYNGIDCTSLTYLNTITQGDLLD---------KKRTRP-----DSVDCTPPE 277
            |.|||||:||..|||||:||:||::||.|::||:.|         ||:..|     :::||:|||
 Frog   144 HFRDLLKSLDLTDAYNGVDCSSLSFLNIISEGDIGDSLCHESNGKKKKRSPADQGLEAIDCSPPE 208

  Fly   278 YVTPGVSDPPILPLHPNVKNAKGPQALKVLTTSAWNPPPGPRKLHGDLMYLYVVTMEDKRFHISA 342
            |:.||.::.|:.||.|...:.|..|.||.:..|.||||||.||:|||||||.|:||||...:|:|
 Frog   209 YILPGSTERPLQPLQPISGDNKPLQCLKSMIMSGWNPPPGNRKMHGDLMYLNVITMEDHHINITA 273

  Fly   343 CSKGFFINQSTDDTFNPKPDNPSHLSHSLIDLLSHISPSFRRAFQTIQKRRTMRHAFERVATPYQ 407
            .::||:|||||.:.|||||..||||||||::||:.:||:|::.|..:||||..||..||:|||||
 Frog   274 SNRGFYINQSTAELFNPKPATPSHLSHSLVELLNQVSPAFKKNFFALQKRRIHRHPLERIATPYQ 338

  Fly   408 VYQWAAPILEHTVDAIRAEDAFSSKLGYEEHIPGQTRDWNEELQTTRELPRKTLPERLLRERAIF 472
            ||.|.||...|.:|.:|||||::|:|||||||||||||||||||||||||:....::.||:||.|
 Frog   339 VYSWVAPSTSHIIDCVRAEDAYNSRLGYEEHIPGQTRDWNEELQTTRELPQALPTDQQLRQRATF 403

  Fly   473 KVHGDFVTAATRGAMAVIDGNVLAINPGEDTKMQMFIWNNIFFSMGFDVRDHYKELGGDAAAFVA 537
            |::.|||.|:||||||||||||:||||.|:||||||||||||||.|||||||||:||||.||.:|
 Frog   404 KINSDFVGASTRGAMAVIDGNVMAINPSEETKMQMFIWNNIFFSFGFDVRDHYKDLGGDHAAHIA 468

  Fly   538 PRYDLHGVRVYNAVDIEGLYTLGTVVVDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLS 602
            ..:||.||:.|:.:|||.||.|||||:|||||||||||||||||:|:::||||||||||||||.|
 Frog   469 ANHDLKGVQAYSDLDIEELYVLGTVVLDYRGYRVTAQSIIPGILDRKEDQSVVYGSIDFGKTVSS 533

  Fly   603 HPKYLELLRQAGKHLKILPHVVLNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLK 667
            ..|||.||:::.|.|||:.|.||||::|.|.||||||||||:||||||||||||||||||:||..
 Frog   534 SVKYLTLLQKSCKPLKIMRHTVLNEKEEEVMLCSSVECKGIVGNDGRHYILDLLRTFPPDMNFFP 598

  Fly   668 LQDVQLSKELVDMGFPIEHRHKLCCLRQELLEAFIEDRHVNFIRIAAARLQQLTTIKQSEKSEAN 732
            |::.:..||.....||..:|||||.||.||:::|.:.::..|:::.            .||::  
 Frog   599 LKEEEALKEECSHCFPKSYRHKLCNLRPELIDSFFQHKYAQFMKLV------------MEKTK-- 649

  Fly   733 PVPALEGAEAASKVNGAEKPDDKEKKNEEEEKKERSTSGEARAAAIVNAIREAQSNVATSNEVQA 797
                    :..|:.|.....|:.:   |.:||||                               
 Frog   650 --------DGDSQQNNGIAHDESQ---ENDEKKE------------------------------- 672

  Fly   798 AEVVKRACAAVGSLKEKEFDFRFNPDVFSPGIRHADGEEGTSLAKQKVLVQEAAEFLVLKQIPAF 862
            .::|::||..|||:.:..||.|||||:.|..:|..:.::..: ..|:.|:.||:.||:..|||||
 Frog   673 VDIVRQACREVGSVLDYTFDIRFNPDICSTVVRFPESQKAVN-QLQRRLLSEASTFLLNVQIPAF 736

  Fly   863 IKEHMSHSSSPIDGQSLTESLHSHGINVRYLGKVIKILSQMPR---MDYLHRIAVLELIVRATKH 924
            ||..::|...|:||:||||:|||||||:||||.:.:.:.|:..   :|:::||.::|::.|:.|.
 Frog   737 IKGCLTHVFVPMDGKSLTEALHSHGINIRYLGTIAETIDQVEERQPLDHVYRIVIMEIVTRSAKQ 801

  Fly   925 IYYTYMQNTEPLHLSAAISHFLNCLLTNGPVNPA--VSSEEAHKKRGNGGKHNKHKSSKGGKGQQ 987
            |...|:|..|...||||:||||||||::.| ||.  :..:|...:|..|.|              
 Frog   802 ILRHYLQGVEMSALSAAVSHFLNCLLSSYP-NPVAHLPPDELMSRRRKGKK-------------- 851

  Fly   988 QQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRI 1052
              :....:||.|.          ||.|:|..||:||..:|:..:|:.|..||::..|.|:.:.::
 Frog   852 --KVRPLENGDSI----------WTSMSPADLWKQICGKARDSYDFTLPRDSVDQLVEKFNLQKV 904

  Fly  1053 SLMRAFCLKVGIQVLLREYNFESKHKPTFGDDDIVNVFPIVKHISPRATDAYNFYTTGQAKIQQG 1117
            :|:|.||.|.|||||||||||||:|||...::||:|:||:||||..:|.:|.......|..|:||
 Frog   905 TLLREFCKKTGIQVLLREYNFESRHKPALTEEDILNIFPVVKHIHIKAKEANELVNKAQISIEQG 969

  Fly  1118 LFKEGYELISGALNLLNNVFGALHQENGSCLRMLARLSYLLGDAQDALAIQQRAVIMSERVNGMD 1182
            ..|:...|::.||...|:|:||:|.|...|||:|||:.:||||..:||..||:||||:||..|.|
 Frog   970 CLKQAAILLNEALVHFNSVYGAVHPEIAVCLRVLARVKFLLGDIAEALDNQQKAVIMTERTMGYD 1034

  Fly  1183 HPSTILEYTHLSLYSFANGHVGMSLKLLYRARYLMVLICGEDHPEVALIDSNISLILHALGEYEL 1247
            |.:||.:|..||||.||:|.:.::||||||||||::|:.|||||.:|.:||||.::|.|:.|.:|
 Frog  1035 HTTTIQDYVLLSLYCFASGQLPVALKLLYRARYLLLLVTGEDHPSMATLDSNIGVVLQAVLECDL 1099

  Fly  1248 SLRFIEHALKLNLKYFGDKDMHVALSYHLMARTQSCMGDFRSALNNEKETYSFYKSQLGENHEKT 1312
            ||||:|.||:.|.||||:|.:.||||:||:|...:...:||:|:.:|||||:.||:.||:.||.|
 Frog  1100 SLRFLEKALETNKKYFGNKSLDVALSHHLIALAHTSKAEFRAAMQHEKETYTIYKALLGDFHEHT 1164

  Fly  1313 RDSAECLRLLTQQAVLLQRKMNDIYSSGKLTSDLPPIHITPPSMGSVLDMLNTINGILFVKISRK 1377
            ::|:..|:.:|||||.|||.||:||.:|.:|: ||.:.|..|.:.::|..||.||||:.:.:|:.
 Frog  1165 KESSAFLKHVTQQAVNLQRTMNEIYKNGSVTT-LPHVQIVSPGIDTLLQQLNIINGIIRINVSKN 1228

  Fly  1378 DIVKVRSEIEKHFKTDSTENEVNDAINSIVAAANNNGEAEDAVSKDIKEQPEAGKQLT-----NG 1437
            |       ...:.|||.|::      |.....|:.:.|.|.|..::.|||.:..|..|     |.
 Frog  1229 D-------TNDNEKTDETQD------NQKTDLASGSLEQEAAPQEEQKEQIDEQKAGTKENQGNP 1280

  Fly  1438 DKAAATEATS 1447
            ::....|.||
 Frog  1281 EEPKEQEETS 1290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cluNP_611095.1 CLU_N 163..232 CDD:464466 46/68 (68%)
GSKIP_dom <324..387 CDD:398795 37/62 (60%)
CLU 445..665 CDD:463814 162/219 (74%)
eIF3_p135 870..1073 CDD:463717 80/207 (39%)
FxSxx_TPR <1117..1309 CDD:468560 101/191 (53%)
TPR repeat 1190..1215 CDD:276809 15/24 (63%)
TPR repeat 1228..1258 CDD:276809 16/29 (55%)
LOC100496989XP_002932134.3 CLU_N 80..149 CDD:464466 46/68 (68%)
CLU 376..596 CDD:463814 162/219 (74%)
eIF3_p135 744..925 CDD:463717 80/207 (39%)
TPR_12 958..1024 CDD:315987 28/65 (43%)
TPR_12 1003..1060 CDD:315987 30/56 (54%)
TPR_12 1079..1155 CDD:315987 38/75 (51%)

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