DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8435 and AT1G17130

DIOPT Version :10

Sequence 1:NP_611092.2 Gene:CG8435 / 36789 FlyBaseID:FBgn0034084 Length:333 Species:Drosophila melanogaster
Sequence 2:NP_001077550.1 Gene:AT1G17130 / 838283 AraportID:AT1G17130 Length:338 Species:Arabidopsis thaliana


Alignment Length:139 Identity:27/139 - (19%)
Similarity:57/139 - (41%) Gaps:27/139 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 VQGALKWHGIGVVLDFAANLEE---------YNGTGTLYVTYNQFDFPLKVTK-PFNSTEPTGSL 169
            |:||....|.|:...:..:|:|         || ...|....|:.:..:::.: .....:..||.
plant    21 VKGAAAKQGEGLNKYYLQHLDELQRLQREKSYN-LNRLEAQRNELNSRVRMLREELQLLQEPGSY 84

  Fly   170 --QFMSIDNSNKIVTVGYPNNKYVQLISRAI------------MTNFDFRDYMIASFRNWNFQNL 220
              :.:.:...||::...:|..|||..|.::|            :.|..:..:::...:.....||
plant    85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNL 149

  Fly   221 LKAVIDEVP 229
            :|  :::||
plant   150 MK--VEKVP 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8435NP_611092.2 Saf4_Yju2 9..330 CDD:461333 27/139 (19%)
AT1G17130NP_001077550.1 Saf4_Yju2 9..336 CDD:461333 27/139 (19%)

Return to query results.
Submit another query.