DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and NYX

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_072089.2 Gene:NYX / 60506 HGNCID:8082 Length:476 Species:Homo sapiens


Alignment Length:508 Identity:122/508 - (24%)
Similarity:185/508 - (36%) Gaps:132/508 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 AAAAAAKASNKYNIDCPKDCKCLNV----LFDCDKLHLERVPV-LPSYVQTLHLANNKLNDTTVL 309
            |..|.|:|       ||..|.|..|    ...||:..|.|||. ||....::.|..|.|      
Human    18 AVGACARA-------CPAACACSTVERGCSVRCDRAGLLRVPAELPCEAVSIDLDRNGL------ 69

  Fly   310 EIRNLLNLTKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLH 374
                                  :|:|                  ..:...||.||.|.|..|.|.
Human    70 ----------------------RFLG------------------ERAFGTLPSLRRLSLRHNNLS 94

  Fly   375 TIELNSFPKSNNLVHLILSFN-EITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKL 438
            .|...:|.....|..|.|:.| ::..::..:||.|:.|..|:|:..||.::|.|:...|..|::|
Human    95 FITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALREL 159

  Fly   439 ALNFNQLEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNL 503
            |...|.........|||.::.:..|:..:|.|                     ::|.|.||   |
Human   160 AAFDNLFRRVPGALRGLANLTHAHLERGRIEA---------------------VASSSLQG---L 200

  Fly   504 TKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQ 568
            .:||.|:|..|.:..:....:.....||.|.|::|.:.|........|.||:||||..|.|    
Human   201 RRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNAL---- 261

  Fly   569 ENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEI 633
                                     |:.|.|.|..|.:|..|.|..|::..:...|...|:.|..
Human   262 -------------------------DRVARAWFADLAELELLYLDRNSIAFVEEGAFQNLSGLLA 301

  Fly   634 LNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEHAVCGYPEHLL 698
            |:|..|.|..:...||:....|.:|......:.|||.|.|.:.|::.  ..:.....|..|..:.
Human   302 LHLNGNRLTVLAWVAFQPGFFLGRLFLFRNPWCCDCRLEWLRDWMEG--SGRVTDVPCASPGSVA 364

  Fly   699 DRHLKSLS---SSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSPTAAS 748
            ...|..::   ||:.:|||         |:::      |:|......||..|:
Human   365 GLDLSQVTFGRSSDGLCVD---------PEEL------NLTTSSPGPSPEPAA 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 80/349 (23%)
leucine-rich repeat 293..316 CDD:275380 3/22 (14%)
leucine-rich repeat 317..338 CDD:275380 2/20 (10%)
leucine-rich repeat 339..362 CDD:275380 1/22 (5%)
leucine-rich repeat 363..386 CDD:275380 8/22 (36%)
leucine-rich repeat 387..410 CDD:275380 7/23 (30%)
leucine-rich repeat 411..434 CDD:275380 8/22 (36%)
leucine-rich repeat 435..457 CDD:275380 7/21 (33%)
leucine-rich repeat 458..481 CDD:275380 3/22 (14%)
leucine-rich repeat 482..505 CDD:275380 5/22 (23%)
leucine-rich repeat 506..529 CDD:275380 5/22 (23%)
leucine-rich repeat 530..553 CDD:275380 7/22 (32%)
leucine-rich repeat 554..577 CDD:275380 7/22 (32%)
leucine-rich repeat 578..604 CDD:275380 4/25 (16%)
leucine-rich repeat 607..630 CDD:275380 6/22 (27%)
leucine-rich repeat 631..652 CDD:275380 7/20 (35%)
LRRCT 665..712 CDD:214507 11/49 (22%)
Ig_3 717..816 CDD:464046 6/32 (19%)
Ig 835..924 CDD:472250
Ig strand B 851..855 CDD:409353
Ig strand C 864..868 CDD:409353
Ig strand E 890..894 CDD:409353
Ig strand F 904..909 CDD:409353
Ig strand G 917..920 CDD:409353
Ig_3 927..1013 CDD:464046
NYXNP_072089.2 LRR 1. /evidence=ECO:0000255 60..84 7/69 (10%)
leucine-rich repeat 63..82 CDD:275380 6/64 (9%)
LRR <69..>307 CDD:443914 77/336 (23%)
leucine-rich repeat 83..106 CDD:275380 8/22 (36%)
LRR 2. /evidence=ECO:0000255 85..108 6/22 (27%)
leucine-rich repeat 107..131 CDD:275380 7/23 (30%)
LRR 3. /evidence=ECO:0000255 110..133 6/22 (27%)
leucine-rich repeat 132..155 CDD:275380 8/22 (36%)
LRR 4. /evidence=ECO:0000255 134..157 7/22 (32%)
leucine-rich repeat 156..178 CDD:275380 7/21 (33%)
LRR 5. /evidence=ECO:0000255 159..181 6/21 (29%)
leucine-rich repeat 179..202 CDD:275380 8/46 (17%)
LRR 6. /evidence=ECO:0000255 182..204 8/45 (18%)
leucine-rich repeat 203..226 CDD:275380 5/22 (23%)
LRR 7. /evidence=ECO:0000255 205..228 3/22 (14%)
leucine-rich repeat 227..250 CDD:275380 7/22 (32%)
LRR 8. /evidence=ECO:0000255 229..252 6/22 (27%)
leucine-rich repeat 251..274 CDD:275380 12/51 (24%)
LRR 9. /evidence=ECO:0000255 254..276 10/50 (20%)
leucine-rich repeat 275..296 CDD:275380 5/20 (25%)
LRR 10. /evidence=ECO:0000255 277..300 5/22 (23%)
LRR 11. /evidence=ECO:0000255 302..324 6/21 (29%)
leucine-rich repeat 323..335 CDD:275378 2/11 (18%)
LRRCT 331..>365 CDD:214507 8/35 (23%)
Blue background indicates that the domain is not in the aligned region.

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