DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and CG18095

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster


Alignment Length:409 Identity:120/409 - (29%)
Similarity:194/409 - (47%) Gaps:24/409 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 NKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLANNHITSISSESLAALPLL 363
            :|.|:|.|..||....||.::|....|..:..  |:....|.||.|.::.::.:...||..|..|
  Fly    25 SKCNNTEVTLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLLHLELQHSGLSDLDDFSLNGLTKL 89

  Fly   364 RTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRV 428
            :.|.||.|.|.::...|......|.:|.||.|.::.::..||.....|..|:|..||:|.:....
  Fly    90 QYLSLSHNNLSSLRSWSSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQIENDS 154

  Fly   429 FKNLNQLKKLALNFNQL-EINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQI 492
            |..|:.||.|.||.||| .|:.|.||||..:.:|.|:.|:|..::...|.....:.::.|..|.:
  Fly   155 FDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLL 219

  Fly   493 SSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTL 557
            |||.......|.:|.|||||.|.:.::|...:.....|:.||||.|.|.:...:.|..|..|:.|
  Fly   220 SSLQFLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERL 284

  Fly   558 NLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQIST 622
            |::||.:..:.:.:.|.:..|.:|::..|.|:.:.::.     |....:|..:.|..|.:::||:
  Fly   285 NISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNL-----FHFNTQLEEIILANNKIEEISS 344

  Fly   623 KAMSGLNNLEILNLGSNALA--------SIQVNAFEHMLRLNKLVFKSLN--------FICDCDL 671
            :.|...|:|..:.|..||::        |..||.|...:.|:....||||        :|...|.
  Fly   345 QMMFNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKSLNLSSLLHFRYINLADN 409

  Fly   672 VWFQQWLKNRFPQQAEHAV 690
            .|...||.....|:..::|
  Fly   410 NWSCNWLVANLVQKLPNSV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 104/343 (30%)
leucine-rich repeat 293..316 CDD:275380 6/14 (43%)
leucine-rich repeat 317..338 CDD:275380 5/22 (23%)
leucine-rich repeat 339..362 CDD:275380 7/22 (32%)
leucine-rich repeat 363..386 CDD:275380 7/22 (32%)
leucine-rich repeat 387..410 CDD:275380 7/22 (32%)
leucine-rich repeat 411..434 CDD:275380 8/22 (36%)
leucine-rich repeat 435..457 CDD:275380 14/22 (64%)
leucine-rich repeat 458..481 CDD:275380 5/22 (23%)
leucine-rich repeat 482..505 CDD:275380 6/22 (27%)
leucine-rich repeat 506..529 CDD:275380 8/22 (36%)
leucine-rich repeat 530..553 CDD:275380 9/22 (41%)
leucine-rich repeat 554..577 CDD:275380 6/22 (27%)
leucine-rich repeat 578..604 CDD:275380 5/25 (20%)
leucine-rich repeat 607..630 CDD:275380 6/22 (27%)
leucine-rich repeat 631..652 CDD:275380 8/28 (29%)
LRRCT 665..712 CDD:214507 7/26 (27%)
Ig_3 717..816 CDD:464046
Ig 835..924 CDD:472250
Ig strand B 851..855 CDD:409353
Ig strand C 864..868 CDD:409353
Ig strand E 890..894 CDD:409353
Ig strand F 904..909 CDD:409353
Ig strand G 917..920 CDD:409353
Ig_3 927..1013 CDD:464046
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 95/317 (30%)
leucine-rich repeat 41..64 CDD:275380 5/22 (23%)
leucine-rich repeat 65..88 CDD:275380 7/22 (32%)
leucine-rich repeat 89..112 CDD:275380 7/22 (32%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 14/22 (64%)
leucine-rich repeat 185..208 CDD:275380 5/22 (23%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 9/22 (41%)
leucine-rich repeat 281..304 CDD:275380 6/22 (27%)
leucine-rich repeat 305..328 CDD:275380 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.

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