DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and Lrrn2

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_034862.1 Gene:Lrrn2 / 16980 MGIID:106037 Length:730 Species:Mus musculus


Alignment Length:816 Identity:188/816 - (23%)
Similarity:289/816 - (35%) Gaps:232/816 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 AAAAAAKASNKYNIDCPKDCKCL-------------NVLFDCDKLHLERVPV-LPSYVQTLHLAN 300
            |...||.....:.:.||..|.|.             ....||:.|.|..||. ||:..|||.|.:
Mouse    14 AGTTAAAPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPRLPAGTQTLLLQS 78

  Fly   301 NKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSE---SLAALPL 362
            |.::.....|:..|.|||::.|.:|                         |.|..   ...|||.
Mouse    79 NSISRIDQTELAYLANLTELDLSQN-------------------------SFSDARDCDFQALPQ 118

  Fly   363 LRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIR 427
            |.:|.|..|:|:.:|.:||....:|..|.|:.|::..::..:||.|.||..|.|::|.|.|:..|
Mouse   119 LLSLHLEENRLNRLEDHSFAGLTSLQELYLNHNQLCRISPRAFAGLGNLLRLHLNSNLLRTIDSR 183

  Fly   428 VFKNLNQLKKLALNFNQ----LEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLA 488
            .|:.|..|:.|.:..|:    |::|   ||.|.::::|.|....:|.:.|.....:..:|::...
Mouse   184 WFEMLPNLEILMIGGNKVDAILDMN---FRPLANLRSLVLAGMSLREISDYALEGLQSLESLSFY 245

  Fly   489 MNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHR 553
            .||::.:.::.|                        |....|:.|||:.|.:....|.....:..
Mouse   246 DNQLAQVPKRAL------------------------EQVPGLKFLDLNKNPLQRVGPGDFANMLH 286

  Fly   554 LKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGN-NL 617
            ||.|.|                .|:|||         :..|:.|..   .|.:|.:||:..| .|
Mouse   287 LKELGL----------------NNMEEL---------VSIDKFALV---NLPELTKLDITNNPRL 323

  Fly   618 KQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKN-R 681
            ..|..:|...|..:|.|.|.:|||:::.....|.:..|.::........|||.:.|......: |
Mouse   324 SFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTHVR 388

  Fly   682 F--PQQAEHAVCGYPEHLLDRHLKSLSSSELV--CVDSPKPRVEQEPDDMLAVNAANITLECIAS 742
            |  ||.   .:|..|..|..|.::.:...|:.  |:....||  ..|..:...:..:..|.|.| 
Mouse   389 FIEPQS---TLCAEPPDLQRRPVREVPFREMTDHCLPLISPR--SFPSSLQIASGESTVLHCRA- 447

  Fly   743 SPTAASLAAADELKIKWRHDNQHVQERPAVHDGASTETQIRHDLSTNQTSIY--GYLRLTNVTYE 805
                   .|..|.:|.|            |.......|..|   |..:..::  |.|.|..||.|
Mouse   448 -------LAEPEPEIYW------------VTPAGVRLTPAR---SGRRYRVFPEGTLELRRVTAE 490

  Fly   806 SAGRYQCVVSNAFGTTYAQKFKISIG--------------------IHPTFLQ---------VPS 841
            .||.|.||..|..|.. .:...:.:|                    .||..:.         |.:
Mouse   491 EAGLYTCVAQNLVGAD-TKTVSVVVGHAPFQPGRDKGPGLKLHVQETHPYHILLFWAPPPNIVST 554

  Fly   842 NLTLDAGEMARLVCSASGDPTPEIA-----LQKFGGSEFPAATE--RRLQV-------------I 886
            |||..:....|      ....|.:|     ..::..:....|||  ..|||             .
Mouse   555 NLTWSSASSLR------DHEAPALARLPRGTHRYNITRLLPATEYWACLQVAFADAHTQLACVWA 613

  Fly   887 REENAFLITNAKPSDSGIYTCTALS----AAGEIKVNATL--------VVNDKP----------- 928
            |.:.|.....|.....|:....||:    |||   :.|.|        ||.:||           
Mouse   614 RTKEASPCHRALGDRPGLIAILALAVLLLAAG---LAAHLGRGQSKQGVVGEKPLLPVWAFWGWS 675

  Fly   929 QPSIPLVHQEVV-------------VGRTCVLQCLS 951
            .||:.:|...:|             :||.|...||:
Mouse   676 APSVRVVSAPLVLPWNPGRKQPRCQMGRGCHHHCLN 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 89/356 (25%)
leucine-rich repeat 293..316 CDD:275380 7/22 (32%)
leucine-rich repeat 317..338 CDD:275380 4/20 (20%)
leucine-rich repeat 339..362 CDD:275380 4/25 (16%)
leucine-rich repeat 363..386 CDD:275380 8/22 (36%)
leucine-rich repeat 387..410 CDD:275380 7/22 (32%)
leucine-rich repeat 411..434 CDD:275380 9/22 (41%)
leucine-rich repeat 435..457 CDD:275380 8/25 (32%)
leucine-rich repeat 458..481 CDD:275380 4/22 (18%)
leucine-rich repeat 482..505 CDD:275380 4/22 (18%)
leucine-rich repeat 506..529 CDD:275380 1/22 (5%)
leucine-rich repeat 530..553 CDD:275380 6/22 (27%)
leucine-rich repeat 554..577 CDD:275380 4/22 (18%)
leucine-rich repeat 578..604 CDD:275380 5/25 (20%)
leucine-rich repeat 607..630 CDD:275380 8/23 (35%)
leucine-rich repeat 631..652 CDD:275380 7/20 (35%)
LRRCT 665..712 CDD:214507 13/51 (25%)
Ig_3 717..816 CDD:464046 25/100 (25%)
Ig 835..924 CDD:472250 24/129 (19%)
Ig strand B 851..855 CDD:409353 1/3 (33%)
Ig strand C 864..868 CDD:409353 1/8 (13%)
Ig strand E 890..894 CDD:409353 1/3 (33%)
Ig strand F 904..909 CDD:409353 0/4 (0%)
Ig strand G 917..920 CDD:409353 0/2 (0%)
Ig_3 927..1013 CDD:464046 11/49 (22%)
Lrrn2NP_034862.1 LRRNT 28..72 CDD:214470 12/43 (28%)
leucine-rich repeat 51..69 CDD:275380 7/17 (41%)
leucine-rich repeat 71..94 CDD:275380 7/22 (32%)
LRR <85..>324 CDD:443914 75/318 (24%)
leucine-rich repeat 95..118 CDD:275380 8/47 (17%)
leucine-rich repeat 119..142 CDD:275380 8/22 (36%)
leucine-rich repeat 143..166 CDD:275380 7/22 (32%)
leucine-rich repeat 167..190 CDD:275380 9/22 (41%)
leucine-rich repeat 191..214 CDD:275380 8/25 (32%)
leucine-rich repeat 215..238 CDD:275380 4/22 (18%)
leucine-rich repeat 239..262 CDD:275380 5/46 (11%)
leucine-rich repeat 263..286 CDD:275380 6/22 (27%)
leucine-rich repeat 287..311 CDD:275380 11/51 (22%)
LRR_8 310..371 CDD:404697 16/60 (27%)
leucine-rich repeat 312..334 CDD:275380 7/21 (33%)
leucine-rich repeat 337..360 CDD:275378 7/22 (32%)
PCC 342..>420 CDD:188093 19/80 (24%)
leucine-rich repeat 361..373 CDD:275378 1/11 (9%)
Ig 430..514 CDD:472250 25/107 (23%)
Ig strand B 441..445 CDD:409421 1/3 (33%)
Ig strand C 454..458 CDD:409421 2/15 (13%)
Ig strand E 480..484 CDD:409421 2/3 (67%)
Ig strand F 494..499 CDD:409421 2/4 (50%)
Ig strand G 507..510 CDD:409421 0/2 (0%)

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