DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbk and Lrrn1

DIOPT Version :10

Sequence 1:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_032542.1 Gene:Lrrn1 / 16979 MGIID:106038 Length:716 Species:Mus musculus


Alignment Length:873 Identity:179/873 - (20%)
Similarity:300/873 - (34%) Gaps:281/873 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 DCPKDCKC-LNVLF------------DCDKLHLERVP-VLPSYVQTLHLANNKLNDTTVLEIRNL 314
            :||:.|.| :...|            ||:.|.|.|:| .|.|..|.|.|.:|.: ..||.|::.|
Mouse    31 ECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNI-AKTVDELQQL 94

  Fly   315 LNLTKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELN 379
            .|||:                      |..:.|:.|:|....||.|..|.||.|..|::..:...
Mouse    95 FNLTE----------------------LDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDY 137

  Fly   380 SFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQ 444
            .....:||..|.::.|:|:.::.::|:.|.||..|.|::|:|..:..|.|.:...|:.|.:..|.
Mouse   138 CLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202

  Fly   445 ----LEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTK 505
                |::|   ||.|.::::|.|....:..:.......:..:|::....|::..:.:..|..:..
Mouse   203 VIGILDMN---FRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPN 264

  Fly   506 LRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEF---KPQHLDCLHRLKTLNLAHN-RLQY 566
            |:.|:|:.|.|.:|:  ..:|...|.:.:|..|.:.|.   ....||.|..|..|...:| :|.|
Mouse   265 LKFLDLNKNPIHKIQ--EGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSY 327

  Fly   567 LQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNL 631
            :....|..|..||.|.|..|.|:.:.:....:.|     .||.:.:|.|.|:             
Mouse   328 IHRLAFRSVPALESLMLNNNALNAVYQKTVESLP-----NLREISIHSNPLR------------- 374

  Fly   632 EILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEHAVCGYPEH 696
                                               |||.:.|......|                
Mouse   375 -----------------------------------CDCVIHWINSNKTN---------------- 388

  Fly   697 LLDRHLKSLSSSELVCVDSPKPRVEQEPDDMLAVNAANITLECIASSPTAASLAAADELKIKWRH 761
              .|.::.||   :.|...|:.|.:|..:.:                                  
Mouse   389 --IRFMEPLS---MFCAMPPEYRGQQVKEVL---------------------------------- 414

  Fly   762 DNQHVQERPAVHDGASTETQIRHDLSTNQTSIYGYLRLTNVTYESAGRYQCVVSNAFGTTYAQKF 826
                :|:        |:|                               ||:.            
Mouse   415 ----IQD--------SSE-------------------------------QCLP------------ 424

  Fly   827 KISIGIHPTFLQVPSNLTLDAGEMARLVCSASGDPTPEIALQKFGGSEFPAATERRLQVIREENA 891
            .||   |.||   |::|.:|.|....|.|.|..:|.|||......|::....|......:..|..
Mouse   425 MIS---HDTF---PNHLNMDIGTTLFLDCRAMAEPEPEIYWVTPIGNKITVETLSDKYKLSSEGT 483

  Fly   892 FLITNAKPSDSGIYTCTALSAAG------EIKVNATLV---------VNDKPQPSIPLVHQEVVV 941
            ..|.|.:..|||.|||.|.:..|      .||||.||:         |......|| ||..:|  
Mouse   484 LEIANIQIEDSGRYTCVAQNVQGADTRVATIKVNGTLLDGAQVLKIYVKQTESHSI-LVSWKV-- 545

  Fly   942 GRTCVLQCLSETANADFELEHPHREW-------FKENKPIHISPTAPDGDRYYFSNNKELLVILN 999
             .:.|:....:.::|..::::||..:       ..|....|:.|:         ::.:..|.:.|
Mouse   546 -NSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPS---------TDYEVCLTVSN 600

  Fly  1000 AQ----------SNDAGHFRCEITDNSRTFTLQSELVVVKENLNWVVLLVGIITVTVICVVVDCC 1054
            ..          :.....|..:|:|:..:    :.|..|..::..|:.|..|             
Mouse   601 IHQQTQKSCVNVTTKTAAFALDISDHETS----TALAAVMGSMFAVISLASI------------- 648

  Fly  1055 IIWCTLRYQKKKLRMSLAAERHSTQLRP 1082
            .|:...|:::|....||......|...|
Mouse   649 AIYIAKRFKRKNYHHSLKKYMQKTSSIP 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbkNP_611091.2 LRR <293..642 CDD:443914 84/356 (24%)
leucine-rich repeat 293..316 CDD:275380 8/22 (36%)
leucine-rich repeat 317..338 CDD:275380 2/20 (10%)
leucine-rich repeat 339..362 CDD:275380 7/22 (32%)
leucine-rich repeat 363..386 CDD:275380 5/22 (23%)
leucine-rich repeat 387..410 CDD:275380 6/22 (27%)
leucine-rich repeat 411..434 CDD:275380 7/22 (32%)
leucine-rich repeat 435..457 CDD:275380 8/25 (32%)
leucine-rich repeat 458..481 CDD:275380 2/22 (9%)
leucine-rich repeat 482..505 CDD:275380 3/22 (14%)
leucine-rich repeat 506..529 CDD:275380 7/22 (32%)
leucine-rich repeat 530..553 CDD:275380 7/25 (28%)
leucine-rich repeat 554..577 CDD:275380 7/23 (30%)
leucine-rich repeat 578..604 CDD:275380 7/25 (28%)
leucine-rich repeat 607..630 CDD:275380 5/22 (23%)
leucine-rich repeat 631..652 CDD:275380 0/20 (0%)
LRRCT 665..712 CDD:214507 8/46 (17%)
Ig_3 717..816 CDD:464046 7/98 (7%)
Ig 835..924 CDD:472250 32/103 (31%)
Ig strand B 851..855 CDD:409353 1/3 (33%)
Ig strand C 864..868 CDD:409353 2/3 (67%)
Ig strand E 890..894 CDD:409353 0/3 (0%)
Ig strand F 904..909 CDD:409353 3/4 (75%)
Ig strand G 917..920 CDD:409353 2/2 (100%)
Ig_3 927..1013 CDD:464046 15/102 (15%)
Lrrn1NP_032542.1 leucine-rich repeat 54..73 CDD:275380 7/18 (39%)
LRR 1 73..95 7/22 (32%)
leucine-rich repeat 74..96 CDD:275380 8/22 (36%)
LRR <89..>322 CDD:443914 61/259 (24%)
LRR 2 96..117 8/42 (19%)
leucine-rich repeat 97..120 CDD:275380 9/44 (20%)
LRR 3 120..141 5/20 (25%)
leucine-rich repeat 121..144 CDD:275380 5/22 (23%)
LRR 4 144..165 6/20 (30%)
leucine-rich repeat 145..168 CDD:275380 6/22 (27%)
LRR 5 168..189 8/20 (40%)
leucine-rich repeat 169..192 CDD:275380 7/22 (32%)
LRR 6 192..213 6/23 (26%)
leucine-rich repeat 193..216 CDD:275380 8/25 (32%)
LRR 7 216..237 2/20 (10%)
leucine-rich repeat 217..240 CDD:275380 2/22 (9%)
LRR 8 240..261 3/20 (15%)
leucine-rich repeat 241..264 CDD:275380 3/22 (14%)
LRR 9 264..285 7/22 (32%)
leucine-rich repeat 265..288 CDD:275380 7/24 (29%)
leucine-rich repeat 289..313 CDD:275380 6/23 (26%)
LRR_8 312..373 CDD:404697 18/65 (28%)
leucine-rich repeat 314..335 CDD:275380 6/20 (30%)
leucine-rich repeat 339..362 CDD:275378 7/27 (26%)
leucine-rich repeat 363..375 CDD:275378 5/59 (8%)
LRRCT 371..419 CDD:214507 15/162 (9%)
I-set 429..516 CDD:400151 27/89 (30%)
Ig strand B 443..447 CDD:409357 1/3 (33%)
Ig strand C 456..460 CDD:409357 2/3 (67%)
Ig strand E 482..486 CDD:409357 0/3 (0%)
Ig strand F 496..501 CDD:409357 3/4 (75%)
Ig strand G 509..512 CDD:409357 0/2 (0%)
FN3 531..600 CDD:214495 14/81 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 692..716
Blue background indicates that the domain is not in the aligned region.

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