DRSC/TRiP Functional Genomics Resources

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Protein Alignment CysRS and Cars1

DIOPT Version :10

Sequence 1:NP_611087.1 Gene:CysRS / 36784 FlyBaseID:FBgn0027091 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_001425105.1 Gene:Cars1 / 293638 RGDID:1310747 Length:831 Species:Rattus norvegicus


Alignment Length:746 Identity:440/746 - (58%)
Similarity:541/746 - (72%) Gaps:19/746 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRGQPAWQAPEAVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDI 67
            :|.||.|..|...:..:|:|:|||||.|:.|:|.||..||||.||||||||||||||||||||||
  Rat    95 RRVQPQWSPPAGTEPCRLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDI 159

  Fly    68 LRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFDEYAAEAQKLPLDELLGQQKEVLQRFQDT 132
            |||:|.|||.|::.|.|||||||||||||||||:||::|  ..||....:||....:.::.|...
  Rat   160 LRRVLRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQY--REQKPSAAQLLKDVGDAMKPFSVK 222

  Fly   133 CAKNTDPDKKIMLDKTLQRMNDAVEALTKAVGKGDEREISEKRL-LYLNEAKDPISDWLDSLKGA 196
            .::.|||||:.||::....:..|.|.|.:||......|..:.|: :.|.||||.:||||||..|:
  Rat   223 LSETTDPDKRQMLERIQNSVKLATEPLEQAVHSNPSGEEVDSRVQVLLEEAKDLLSDWLDSTGGS 287

  Fly   197 QINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVY 261
            ::.||::|..||::||::||.||::||:||||||||||||||:||.|:|||:|||..||:|.|||
  Rat   288 EVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVY 352

  Fly   262 FDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKAGEPWWD 326
            ||...|...|||.|.||||||.||.|:||||||||||:.||||||||.||||||||||.|||.|.
  Rat   353 FDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWP 417

  Fly   327 SPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGH 391
            .|||||||||||||||||..:.|.:.|||.||.||:|||||||||||||.|....||:|||||||
  Rat   418 CPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGH 482

  Fly   392 LTIAGCKMSKSLKNFVTIQEALKKHSATQLRLAFLLHSWKDTLDYSENTMEMATQYEKFLNEFFL 456
            |||||||||||||||:||::|||||||.|||||||:||||||||||.||||.|.|||||:|||||
  Rat   483 LTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFMNEFFL 547

  Fly   457 NVKDLTRHVLSEEPRRQFDAWTEVEAALQKKFSNAQVQVHASLCDNIDTRSALDAIRELVSVSNV 521
            ||||:.|..:  :...||:.|...|..|.|.|.:.:..||.:||||||||:.::.:|.|||..|:
  Rat   548 NVKDILRAPV--DITGQFEKWEAEEVELNKNFYDKKTAVHEALCDNIDTRTVMEEMRALVSQCNL 610

  Fly   522 YIRDNKT---RLNSLLLRNVATYITDLLHVFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPY 583
            |:...|.   |.|..||.|:|.|:|.:|.:||||. ....:|||| ||.|   ...:||:||:||
  Rat   611 YMAARKAARRRPNRALLENIAMYLTHMLKIFGAIE-EENPLGFPV-GGPG---TNLNLESTVMPY 670

  Fly   584 VQSLAEFRYLVREQAKTLKAFDILKLCDDLRDNVLPNLGVRLEDKDIGKYAVKLVDRDSLLRERE 648
            :|.|:|||..||:.|:..|..::|:|.|.|||::||.||||.||.:.....|||||||:||:|:|
  Rat   671 LQVLSEFREGVRKIAREKKVLEVLQLSDALRDDILPELGVRFEDHEGLPTVVKLVDRDTLLKEKE 735

  Fly   649 AKLAAEAEKAAEKE---RKKQAAAEAAAAKEAQRRVNPKEMFLAETEKYSAFDENGLPTHDKEGK 710
            .|..||.||..:||   ||||   |..|||.|:.:..|.|||.:||:|||.||||||||||.|||
  Rat   736 EKKRAEEEKRRKKEEAARKKQ---EQEAAKLAKMKTPPSEMFRSETDKYSKFDENGLPTHDTEGK 797

  Fly   711 EVSKGQIKKLQKLQQQQEQRYNEYLASIEKA 741
            |:||||.|||:||.:.||:.|.|||..::.:
  Rat   798 ELSKGQTKKLKKLFEAQEKVYKEYLQQLQNS 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysRSNP_611087.1 PTZ00399 2..737 CDD:240402 440/740 (59%)
Cars1NP_001425105.1 None

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