DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhe and CXE20

DIOPT Version :10

Sequence 1:NP_523758.3 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_201024.1 Gene:CXE20 / 836339 AraportID:AT5G62180 Length:327 Species:Arabidopsis thaliana


Alignment Length:139 Identity:35/139 - (25%)
Similarity:52/139 - (37%) Gaps:53/139 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 YLNVYRP-------EIRKSALPVMVYIHGGGFFGGSAGPGVTGPEYFMD-SGEV------ILVTM 165
            :|.:|.|       .:....||::||.|||||...|     ...:.|.| ..||      |:|:.
plant    60 WLRLYLPSSAVNEGNVSSQKLPIVVYYHGGGFILCS-----VDMQLFHDFCSEVARDLNAIVVSP 119

  Fly   166 AYRLGP--------------FGFLSTQDAVMSGNFGLKDQNLALRWVQRNIRFFGGDPQRVTIFG 216
            :|||.|              ..::.|.|          |:     |::.:..|     ..|.:.|
plant   120 SYRLAPEHRLPAAYDDGVEALDWIKTSD----------DE-----WIKSHADF-----SNVFLMG 164

  Fly   217 QSAGGVAAH 225
            .||||..|:
plant   165 TSAGGNLAY 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_523758.3 alpha/beta hydrolases 38..527 CDD:473884 35/139 (25%)
CXE20NP_201024.1 Abhydrolase_3 83..303 CDD:400284 30/116 (26%)

Return to query results.
Submit another query.