DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jhe and CXE12

DIOPT Version :10

Sequence 1:NP_523758.3 Gene:Jhe / 36780 FlyBaseID:FBgn0010052 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_190438.1 Gene:CXE12 / 824030 AraportID:AT3G48690 Length:324 Species:Arabidopsis thaliana


Alignment Length:245 Identity:62/245 - (25%)
Similarity:98/245 - (40%) Gaps:81/245 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LQGYQSERFEAFMGIPYALPPIGDLRFSNPKVMPKLLGMYDASAPKMDCIQKNYLLPTPVVYGDE 111
            |:.|:|.|.|..|| ...:||                    :|.|:...:.|:      |||..:
plant    13 LKIYKSGRIERLMG-EATVPP--------------------SSEPQNGVVSKD------VVYSAD 50

  Fly   112 DCLYLNVYRPEIRKSA------LPVMVYIHGGGFFGGSAGPGVTGPEYF------MDSGEVILVT 164
            :.|.:.:|.||  |:|      ||::||.|||||...:|    ..|.|.      :.:...:.|:
plant    51 NNLSVRIYLPE--KAAAETDSKLPLLVYFHGGGFIIETA----FSPTYHTFLTTSVSASNCVAVS 109

  Fly   165 MAYRLGPFGFLSTQDAVMSGNFGLKDQNLALRWVQRNIRFFG--------GDPQRVTIFGQSAG- 220
            :.||..|...:|..         ..|...||:||..:|...|        .|..||.:.|.||| 
plant   110 VDYRRAPEHPISVP---------FDDSWTALKWVFTHITGSGQEDWLNKHADFSRVFLSGDSAGA 165

  Fly   221 GVAAHMHL------LSPRSHGLFHRVISMSGTANV----PFAIAEQPLEQ 260
            .:..||.:      |||   ||     :.:|.:.:    |:..::.|:::
plant   166 NIVHHMAMRAAKEKLSP---GL-----NDTGISGIILLHPYFWSKTPIDE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JheNP_523758.3 alpha/beta hydrolases 38..527 CDD:473884 62/245 (25%)
CXE12NP_190438.1 LpqC 28..>81 CDD:442732 20/80 (25%)
Abhydrolase_3 74..282 CDD:400284 39/155 (25%)

Return to query results.
Submit another query.